Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FHG entry

There are 2 chains in PDB entry 6FHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLN 156
B
MET 1GLY 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6FHG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
39 50Right-handed alpha
Helix 3
AA3
A
81 86Right-handed 310
Helix 4
AA4
A
106 123Right-handed alpha
Helix 5
AA5
A
131 135Right-handed alpha
Helix 6
AA6
A
144 152Right-handed alpha
Helix 7
AA7
B
6 11Right-handed alpha
Helix 8
AA8
B
39 50Right-handed alpha
Helix 9
AA9
B
81 86Right-handed 310
Helix 10
AB1
B
106 123Right-handed alpha
Helix 11
AB2
B
131 135Right-handed alpha
Helix 12
AB3
B
144 152Right-handed alpha
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There are 2 sheets in PDB entry 6FHG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 70first strand
Strand 2
A
60 62anti-parallel
Strand 3
A
88 93parallel
Strand 4
A
26 31parallel
Strand 5
A
127 130parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
68 70first strand
Strand 2
B
60 62anti-parallel
Strand 3
B
88 93parallel
Strand 4
B
26 31parallel
Strand 5
B
127 130parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il