Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FHI entry

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 6FHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 724
B	MET 1	LYS 754
C	SER -1	SER 742
R	U 1	U 13
V	A 1	G 16
X	TYR 1	THR 4
X	PRO 6	THR 15
X	PRO 17	TYR 19

There are 93 helices in PDB entry 6FHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	9	Right-handed alpha
Helix 2	AA2	A	10	22	Right-handed alpha
Helix 3	AA3	A	35	50	Right-handed alpha
Helix 4	AA4	A	83	98	Right-handed alpha
Helix 5	AA5	A	127	138	Right-handed alpha
Helix 6	AA6	A	158	160	Right-handed 310
Helix 7	AA7	A	164	185	Right-handed alpha
Helix 8	AA8	A	208	218	Right-handed alpha
Helix 9	AA9	A	225	236	Right-handed alpha
Helix 10	AB1	A	240	249	Right-handed alpha
Helix 11	AB2	A	302	312	Right-handed alpha
Helix 12	AB3	A	330	348	Right-handed alpha
Helix 13	AB4	A	358	365	Right-handed alpha
Helix 14	AB5	A	375	380	Right-handed alpha
Helix 15	AB6	A	400	410	Right-handed alpha
Helix 16	AB7	A	428	448	Right-handed alpha
Helix 17	AB8	A	448	471	Right-handed alpha
Helix 18	AB9	A	524	533	Right-handed 310
Helix 19	AC1	A	567	575	Right-handed alpha
Helix 20	AC2	A	577	599	Right-handed alpha
Helix 21	AC3	A	602	609	Right-handed alpha
Helix 22	AC4	A	627	645	Right-handed alpha
Helix 23	AC5	A	647	669	Right-handed alpha
Helix 24	AC6	A	677	687	Right-handed alpha
Helix 25	AC7	A	692	714	Right-handed alpha
Helix 26	AC8	B	5	11	Right-handed 310
Helix 27	AC9	B	17	22	Right-handed 310
Helix 28	AD1	B	35	50	Right-handed alpha
Helix 29	AD2	B	84	99	Right-handed alpha
Helix 30	AD3	B	101	117	Right-handed alpha
Helix 31	AD4	B	118	124	Right-handed 310
Helix 32	AD5	B	138	153	Right-handed alpha
Helix 33	AD6	B	156	161	Right-handed 310
Helix 34	AD7	B	162	173	Right-handed alpha
Helix 35	AD8	B	213	222	Right-handed alpha
Helix 36	AD9	B	245	265	Right-handed alpha
Helix 37	AE1	B	274	293	Right-handed alpha
Helix 38	AE2	B	308	313	Right-handed alpha
Helix 39	AE3	B	314	326	Right-handed alpha
Helix 40	AE4	B	330	338	Right-handed alpha
Helix 41	AE5	B	338	346	Right-handed alpha
Helix 42	AE6	B	370	374	Right-handed 310
Helix 43	AE7	B	382	394	Right-handed alpha
Helix 44	AE8	B	414	427	Right-handed alpha
Helix 45	AE9	B	428	433	Right-handed alpha
Helix 46	AF1	B	455	473	Right-handed alpha
Helix 47	AF2	B	504	512	Right-handed 310
Helix 48	AF3	B	518	537	Right-handed alpha
Helix 49	AF4	B	540	559	Right-handed alpha
Helix 50	AF5	B	572	583	Right-handed alpha
Helix 51	AF6	B	585	589	Right-handed 310
Helix 52	AF7	B	590	594	Right-handed 310
Helix 53	AF8	B	607	613	Right-handed alpha
Helix 54	AF9	B	614	616	Right-handed 310
Helix 55	AG1	B	617	625	Right-handed alpha
Helix 56	AG2	B	672	677	Right-handed 310
Helix 57	AG3	B	681	700	Right-handed alpha
Helix 58	AG4	B	701	705	Right-handed 310
Helix 59	AG5	B	713	732	Right-handed alpha
Helix 60	AG6	B	736	753	Right-handed alpha
Helix 61	AG7	C	0	13	Right-handed alpha
Helix 62	AG8	C	13	23	Right-handed alpha
Helix 63	AG9	C	27	33	Right-handed alpha
Helix 64	AH1	C	42	51	Right-handed alpha
Helix 65	AH2	C	62	67	Right-handed alpha
Helix 66	AH3	C	92	103	Right-handed alpha
Helix 67	AH4	C	110	115	Right-handed alpha
Helix 68	AH5	C	115	127	Right-handed alpha
Helix 69	AH6	C	155	168	Right-handed alpha
Helix 70	AH7	C	169	172	Right-handed 310
Helix 71	AH8	C	179	193	Right-handed alpha
Helix 72	AH9	C	199	212	Right-handed alpha
Helix 73	AI1	C	225	230	Right-handed alpha
Helix 74	AI2	C	231	236	Right-handed alpha
Helix 75	AI3	C	251	272	Right-handed alpha
Helix 76	AI4	C	275	286	Right-handed alpha
Helix 77	AI5	C	294	301	Right-handed alpha
Helix 78	AI6	C	305	315	Right-handed alpha
Helix 79	AI7	C	390	405	Right-handed alpha
Helix 80	AI8	C	407	413	Right-handed alpha
Helix 81	AI9	C	429	441	Right-handed alpha
Helix 82	AJ1	C	442	450	Right-handed alpha
Helix 83	AJ2	C	541	556	Right-handed alpha
Helix 84	AJ3	C	556	566	Right-handed alpha
Helix 85	AJ4	C	567	573	Right-handed alpha
Helix 86	AJ5	C	574	576	Right-handed 310
Helix 87	AJ6	C	577	584	Right-handed alpha
Helix 88	AJ7	C	588	606	Right-handed alpha
Helix 89	AJ8	C	611	619	Right-handed alpha
Helix 90	AJ9	C	620	623	Right-handed 310
Helix 91	AK1	C	676	682	Right-handed 310
Helix 92	AK2	C	701	705	Right-handed 310
Helix 93	AK3	C	710	716	Right-handed 310

There are 26 sheets in PDB entry 6FHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	53	54	anti-parallel
Strand 3	A	73	74	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	111	first strand
Strand 2	A	116	118	anti-parallel
Strand 3	A	143	144	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	147	first strand
Strand 2	A	155	156	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	259	first strand
Strand 2	A	674	675	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	293	first strand
Strand 2	A	491	501	anti-parallel
Strand 3	A	475	486	anti-parallel
Strand 4	A	354	355	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	324	first strand
Strand 2	A	536	545	anti-parallel
Strand 3	A	552	566	anti-parallel
Strand 4	A	512	521	anti-parallel
Strand 5	A	491	501	anti-parallel
Strand 6	A	475	486	anti-parallel
Strand 7	A	415	416	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	373	first strand
Strand 2	B	364	368	parallel
Strand 3	B	355	359	anti-parallel
Strand 4	A	386	387	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	626	first strand
Strand 2	A	614	618	anti-parallel
Strand 3	B	2	3	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	64	67	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	130	first strand
Strand 2	B	135	137	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	193	first strand
Strand 2	B	198	212	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	243	first strand
Strand 2	B	223	228	anti-parallel
Strand 3	B	348	350	parallel
Strand 4	B	400	402	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	443	first strand
Strand 2	B	446	453	anti-parallel
Strand 3	B	298	305	anti-parallel
Strand 4	B	483	486	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	492	first strand
Strand 2	B	495	498	anti-parallel
Strand 3	B	501	502	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	642	644	first strand
Strand 2	B	654	656	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	667	668	first strand
Strand 2	C	57	59	anti-parallel
Strand 3	C	89	91	anti-parallel
Strand 4	C	78	82	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	135	first strand
Strand 2	C	240	245	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	146	first strand
Strand 2	C	215	220	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	292	293	first strand
Strand 2	C	287	289	anti-parallel
Strand 3	C	529	531	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	324	first strand
Strand 2	C	329	335	anti-parallel
Strand 3	C	361	366	anti-parallel
Strand 4	C	370	377	anti-parallel
Strand 5	C	380	388	anti-parallel
Strand 6	C	478	481	parallel
Strand 7	C	460	463	anti-parallel
Strand 8	C	469	470	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	338	345	first strand
Strand 2	C	351	358	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	453	first strand
Strand 2	C	473	475	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	504	506	anti-parallel
Strand 3	C	511	513	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	640	first strand
Strand 2	C	643	648	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	657	659	first strand
Strand 2	C	664	667	anti-parallel
Strand 3	C	670	671	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	694	699	first strand
Strand 2	C	730	736	anti-parallel
Strand 3	C	721	727	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHI