Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FHJ entry

There is 1 chain in PDB entry 6FHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3UNK 2303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6FHJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
94 97Right-handed 310
Helix 2
AA2
A
98 108Right-handed alpha
Helix 3
AA3
A
113 118Right-handed alpha
Helix 4
AA4
A
128 132Right-handed 310
Helix 5
AA5
A
165 169Right-handed 310
Helix 6
AA6
A
170 181Right-handed alpha
Helix 7
AA7
A
185 190Right-handed 310
Helix 8
AA8
A
198 219Right-handed alpha
Helix 9
AA9
A
233 237Right-handed 310
Helix 10
AB1
A
255 279Right-handed alpha
Helix 11
AB2
A
283 311Right-handed alpha
Helix 12
AB3
A
327 343Right-handed alpha
Helix 13
AB4
A
344 357Right-handed alpha
Helix 14
AB5
A
371 380Right-handed alpha
Helix 15
AB6
A
381 383Right-handed 310
Helix 16
AB7
A
384 407Right-handed alpha
Helix 17
AB8
A
422 441Right-handed alpha
Helix 18
AB9
A
442 457Right-handed alpha
Helix 19
AC1
A
530 534Right-handed 310
Helix 20
AC2
A
542 556Right-handed alpha
Helix 21
AC3
A
670 674Right-handed 310
Helix 22
AC4
A
777 779Right-handed 310
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There are 13 sheets in PDB entry 6FHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 9first strand
Strand 2
A
22 27anti-parallel
Strand 3
A
59 65anti-parallel
Strand 4
A
51 56anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
15 16first strand
Strand 2
A
88 91parallel
Strand 3
A
73 80anti-parallel
Strand 4
A
35 40anti-parallel
Strand 5
A
43 49anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
15 16first strand
Strand 2
A
88 91parallel
Strand 3
A
73 80anti-parallel
Strand 4
A
83 84anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
571 573first strand
Strand 2
A
583 588anti-parallel
Strand 3
A
611 616anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
579 580first strand
Strand 2
A
639 648parallel
Strand 3
A
625 633anti-parallel
Strand 4
A
595 599anti-parallel
Strand 5
A
602 603anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
659 662first strand
Strand 2
A
802 812anti-parallel
Strand 3
A
698 706anti-parallel
Strand 4
A
687 695anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
659 662first strand
Strand 2
A
802 812anti-parallel
Strand 3
A
730 736anti-parallel
Strand 4
A
770 775anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
678 682first strand
Strand 2
A
713 717anti-parallel
Strand 3
A
788 794anti-parallel
Strand 4
A
744 750anti-parallel
Strand 5
A
755 757anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
821 827first strand
Strand 2
A
838 845anti-parallel
Strand 3
A
880 886anti-parallel
Strand 4
A
867 868anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
831 833first strand
Strand 2
A
912 918parallel
Strand 3
A
891 900anti-parallel
Strand 4
A
854 859anti-parallel
Strand 5
A
862 865anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
831 833first strand
Strand 2
A
912 918parallel
Strand 3
A
891 900anti-parallel
Strand 4
A
907 908anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
963 967first strand
Strand 2
A
2213 2217anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2002 2005first strand
Strand 2
A
971 976anti-parallel
Strand 3
A
2203 2209anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il