Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FHP entry

There are 4 chains in PDB entry 6FHP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 5	ILE 346
B	SER 5	ILE 346
C	GLY 257	VAL 315
D	VAL 255	LYS 316

There are 8 helices in PDB entry 6FHP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	296	300	Right-handed 310
Helix 2	AA2	B	296	300	Right-handed 310
Helix 3	AA3	C	259	275	Right-handed alpha
Helix 4	AA4	C	280	297	Right-handed alpha
Helix 5	AA5	C	300	313	Right-handed alpha
Helix 6	AA6	D	259	275	Right-handed alpha
Helix 7	AA7	D	280	297	Right-handed alpha
Helix 8	AA8	D	300	312	Right-handed alpha

There are 14 sheets in PDB entry 6FHP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	337	342	anti-parallel
Strand 3	A	323	329	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	49	first strand
Strand 2	A	56	60	anti-parallel
Strand 3	A	63	67	anti-parallel
Strand 4	A	75	79	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	90	first strand
Strand 2	A	94	98	anti-parallel
Strand 3	A	105	109	anti-parallel
Strand 4	A	112	115	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	128	first strand
Strand 2	A	136	140	anti-parallel
Strand 3	A	145	148	anti-parallel
Strand 4	A	156	158	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	175	first strand
Strand 2	A	178	186	anti-parallel
Strand 3	A	192	194	anti-parallel
Strand 4	A	202	203	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	222	first strand
Strand 2	A	230	236	anti-parallel
Strand 3	A	249	254	anti-parallel
Strand 4	A	262	266	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	281	first strand
Strand 2	A	288	295	anti-parallel
Strand 3	A	301	308	anti-parallel
Strand 4	A	314	319	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	24	first strand
Strand 2	B	337	342	anti-parallel
Strand 3	B	323	329	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	56	60	anti-parallel
Strand 3	B	63	67	anti-parallel
Strand 4	B	75	79	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	90	first strand
Strand 2	B	94	98	anti-parallel
Strand 3	B	105	109	anti-parallel
Strand 4	B	112	115	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	128	first strand
Strand 2	B	136	140	anti-parallel
Strand 3	B	145	148	anti-parallel
Strand 4	B	156	158	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	175	first strand
Strand 2	B	178	186	anti-parallel
Strand 3	B	192	194	anti-parallel
Strand 4	B	202	203	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	222	first strand
Strand 2	B	230	236	anti-parallel
Strand 3	B	249	254	anti-parallel
Strand 4	B	262	266	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	281	first strand
Strand 2	B	288	295	anti-parallel
Strand 3	B	301	308	anti-parallel
Strand 4	B	314	319	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FHP

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FHP