Analysis of interatomic Contacts of Structural Units in PDB entry:
6FI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FI2 entry

There is 1 chain in PDB entry 6FI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 28HIS 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 6FI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 43Right-handed alpha
Helix 2
AA2
A
73 82Right-handed alpha
Helix 3
AA3
A
210 215Right-handed alpha
Helix 4
AA4
A
295 299Right-handed 310
Helix 5
AA5
A
302 306Right-handed 310
Helix 6
AA6
A
314 326Right-handed alpha
Helix 7
AA7
A
354 358Right-handed 310
Helix 8
AA8
A
371 382Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 6FI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
86 90parallel
Strand 3
A
108 111parallel
Strand 4
A
130 135parallel
Strand 5
A
157 162parallel
Strand 6
A
181 186parallel
Strand 7
A
218 222parallel
Strand 8
A
240 244parallel
Strand 9
A
263 267parallel
Strand 10
A
334 338parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
117 120parallel
Strand 3
A
138 140parallel
Strand 4
A
165 167parallel
Strand 5
A
189 195parallel
Strand 6
A
225 231parallel
Strand 7
A
247 249parallel
Strand 8
A
270 273parallel
Strand 9
A
341 344parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
124 127parallel
Strand 3
A
148 153parallel
Strand 4
A
172 177parallel
Strand 5
A
197 199parallel
Strand 6
A
235 237parallel
Strand 7
A
257 259parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
290 293anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il