Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 6FIA entry
There are 6 chains in PDB entry 6FIA
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
|---|
A
|
PRO 50 | TYR 152 |
B
|
SER 53 | TYR 152 |
C
|
GLY 63 | ASP 151 |
D
|
GLY 49 | TYR 152 |
E
|
GLU 65 | TYR 152 |
F
|
GLU 65 | TYR 152 |
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There are 13
helices in PDB entry 6FIA. Click on helix of interest for
CSU analysis.
Helix
number
| Helix
ID | Chain
ID |
Initial
residue | Terminal
residue |
Helix class |
|---|
| Helix 1 |
AA1 | A
| 51 |
90 | Right-handed alpha |
| Helix 2 |
AA2 | A
| 92 |
151 | Right-handed alpha |
| Helix 3 |
AA3 | B
| 54 |
90 | Right-handed alpha |
| Helix 4 |
AA4 | B
| 92 |
151 | Right-handed alpha |
| Helix 5 |
AA5 | C
| 65 |
90 | Right-handed alpha |
| Helix 6 |
AA6 | C
| 92 |
149 | Right-handed alpha |
| Helix 7 |
AA7 | D
| 52 |
60 | Right-handed alpha |
| Helix 8 |
AA8 | D
| 67 |
90 | Right-handed alpha |
| Helix 9 |
AA9 | D
| 92 |
149 | Right-handed alpha |
| Helix 10 |
AB1 | E
| 66 |
90 | Right-handed alpha |
| Helix 11 |
AB2 | E
| 92 |
150 | Right-handed alpha |
| Helix 12 |
AB3 | F
| 66 |
90 | Right-handed alpha |
| Helix 13 |
AB4 | F
| 92 |
150 | Right-handed alpha |
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There are no sheets in PDB entry
6FIA
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il