Analysis of interatomic Contacts of Structural Units in PDB entry:
6FJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FJH entry

There are 2 chains in PDB entry 6FJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4VAL 438
B
 THR 2VAL 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6FJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 27Right-handed alpha
Helix 2
AA2
A
71 81Right-handed alpha
Helix 3
AA3
A
110 130Right-handed alpha
Helix 4
AA4
A
142 150Right-handed alpha
Helix 5
AA5
A
153 160Right-handed alpha
Helix 6
AA6
A
160 170Right-handed alpha
Helix 7
AA7
A
174 178Right-handed 310
Helix 8
AA8
A
179 189Right-handed alpha
Helix 9
AA9
A
208 219Right-handed alpha
Helix 10
AB1
A
257 265Right-handed alpha
Helix 11
AB2
A
269 277Right-handed alpha
Helix 12
AB3
A
291 295Right-handed 310
Helix 13
AB4
A
313 317Right-handed 310
Helix 14
AB5
A
329 335Right-handed 310
Helix 15
AB6
A
352 354Right-handed 310
Helix 16
AB7
A
368 378Right-handed alpha
Helix 17
AB8
A
379 381Right-handed 310
Helix 18
AB9
A
397 413Right-handed alpha
Helix 19
AC1
A
422 437Right-handed alpha
Helix 20
AC2
B
16 27Right-handed alpha
Helix 21
AC3
B
71 81Right-handed alpha
Helix 22
AC4
B
110 130Right-handed alpha
Helix 23
AC5
B
142 150Right-handed alpha
Helix 24
AC6
B
153 160Right-handed alpha
Helix 25
AC7
B
160 166Right-handed alpha
Helix 26
AC8
B
174 178Right-handed 310
Helix 27
AC9
B
179 189Right-handed alpha
Helix 28
AD1
B
208 219Right-handed alpha
Helix 29
AD2
B
257 265Right-handed alpha
Helix 30
AD3
B
270 277Right-handed alpha
Helix 31
AD4
B
291 295Right-handed 310
Helix 32
AD5
B
313 317Right-handed 310
Helix 33
AD6
B
329 335Right-handed 310
Helix 34
AD7
B
368 378Right-handed alpha
Helix 35
AD8
B
379 381Right-handed 310
Helix 36
AD9
B
397 413Right-handed alpha
Helix 37
AE1
B
422 437Right-handed alpha
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There are 10 sheets in PDB entry 6FJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
31 35parallel
Strand 3
A
9 13parallel
Strand 4
A
251 254parallel
Strand 5
A
387 389parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
56 60anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
201 203anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
92 95anti-parallel
Strand 3
A
304 307parallel
Strand 4
A
323 327anti-parallel
Strand 5
A
342 345anti-parallel
Strand 6
A
281 289anti-parallel
Strand 7
A
356 365anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 233first strand
Strand 2
A
238 242anti-parallel
Strand 3
A
246 249anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
31 35parallel
Strand 3
B
9 13parallel
Strand 4
B
251 254parallel
Strand 5
B
387 389parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 52first strand
Strand 2
B
55 60anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
201 203anti-parallel
Strand 3
B
85 87anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
92 95anti-parallel
Strand 3
B
304 307parallel
Strand 4
B
323 327anti-parallel
Strand 5
B
342 345anti-parallel
Strand 6
B
281 289anti-parallel
Strand 7
B
356 365anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 233first strand
Strand 2
B
238 242anti-parallel
Strand 3
B
246 249anti-parallel
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