Analysis of interatomic Contacts of Structural Units in PDB entry:
6FJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FJQ entry

There are 2 chains in PDB entry 6FJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLU 196
B
 ASP 2GLU 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6FJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 63Right-handed 310
Helix 2
AA2
A
85 87Right-handed 310
Helix 3
AA3
A
105 109Right-handed 310
Helix 4
AA4
A
133 135Right-handed 310
Helix 5
AA5
A
145 147Right-handed 310
Helix 6
AA6
B
60 63Right-handed 310
Helix 7
AA7
B
85 87Right-handed 310
Helix 8
AA8
B
105 109Right-handed 310
Helix 9
AA9
B
133 135Right-handed 310
Helix 10
AB1
B
145 147Right-handed 310
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There are 6 sheets in PDB entry 6FJQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
5 8anti-parallel
Strand 3
A
24 33anti-parallel
Strand 4
A
36 45anti-parallel
Strand 5
A
188 193anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
179 181anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 72first strand
Strand 2
A
166 173anti-parallel
Strand 3
A
151 158anti-parallel
Strand 4
A
137 143anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
5 8anti-parallel
Strand 3
B
24 33anti-parallel
Strand 4
B
36 45anti-parallel
Strand 5
B
188 193anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
179 181anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 72first strand
Strand 2
B
166 173anti-parallel
Strand 3
B
151 158anti-parallel
Strand 4
B
137 143anti-parallel
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