Analysis of interatomic Contacts of Structural Units in PDB entry:
6FJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FJU entry

There are 2 chains in PDB entry 6FJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLU 175
B
 HIS 0GLY 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6FJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 19Right-handed alpha
Helix 2
AA2
A
47 50Right-handed 310
Helix 3
AA3
A
54 57Right-handed 310
Helix 4
AA4
A
58 73Right-handed alpha
Helix 5
AA5
A
93 107Right-handed alpha
Helix 6
AA6
A
117 124Right-handed alpha
Helix 7
AA7
A
125 129Right-handed 310
Helix 8
AA8
A
152 167Right-handed alpha
Helix 9
AA9
B
6 19Right-handed alpha
Helix 10
AB1
B
47 50Right-handed 310
Helix 11
AB2
B
54 57Right-handed 310
Helix 12
AB3
B
58 72Right-handed alpha
Helix 13
AB4
B
93 107Right-handed alpha
Helix 14
AB5
B
117 124Right-handed alpha
Helix 15
AB6
B
125 129Right-handed 310
Helix 16
AB7
B
152 168Right-handed alpha
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There are 3 sheets in PDB entry 6FJU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
111 116anti-parallel
Strand 4
A
77 84parallel
Strand 5
A
26 34anti-parallel
Strand 6
A
37 45anti-parallel
Strand 7
A
3 5parallel
Strand 8
A
147 149parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
B
171 172parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
131 136anti-parallel
Strand 3
B
111 115anti-parallel
Strand 4
B
77 84parallel
Strand 5
B
26 34anti-parallel
Strand 6
B
37 45anti-parallel
Strand 7
B
3 5parallel
Strand 8
B
147 149parallel
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