Analysis of interatomic Contacts of Structural Units in PDB entry:
6FKQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FKQ entry

There are 2 chains in PDB entry 6FKQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 39LYS 453
B
 MET 225PRO 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6FKQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 102Right-handed 310
Helix 2
AA2
A
105 110Right-handed alpha
Helix 3
AA3
A
180 186Right-handed alpha
Helix 4
AA4
A
194 198Right-handed 310
Helix 5
AA5
A
231 234Right-handed 310
Helix 6
AA6
A
235 242Right-handed alpha
Helix 7
AA7
A
264 270Right-handed alpha
Helix 8
AA8
A
353 360Right-handed alpha
Helix 9
AA9
B
238 242Right-handed 310
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There are 6 sheets in PDB entry 6FKQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 83first strand
Strand 2
A
86 94anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 137first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
158 164anti-parallel
Strand 4
A
172 178anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 221first strand
Strand 2
A
142 150anti-parallel
Strand 3
A
278 285anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
366 369anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 389first strand
Strand 2
A
401 403anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 296first strand
Strand 2
A
302 306anti-parallel
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