Analysis of interatomic Contacts of Structural Units in PDB entry:
6FKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FKT entry

There are 2 chains in PDB entry 6FKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 300
B
 SER 2GLY 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6FKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 48Right-handed alpha
Helix 2
AA2
A
49 52Right-handed 310
Helix 3
AA3
A
60 69Right-handed alpha
Helix 4
AA4
A
82 86Right-handed 310
Helix 5
AA5
A
102 118Right-handed alpha
Helix 6
AA6
A
132 136Right-handed 310
Helix 7
AA7
A
150 159Right-handed alpha
Helix 8
AA8
A
179 185Right-handed alpha
Helix 9
AA9
A
187 196Right-handed alpha
Helix 10
AB1
A
214 220Right-handed alpha
Helix 11
AB2
A
254 266Right-handed alpha
Helix 12
AB3
A
274 278Right-handed 310
Helix 13
AB4
A
292 298Right-handed alpha
Helix 14
AB5
B
28 48Right-handed alpha
Helix 15
AB6
B
49 52Right-handed 310
Helix 16
AB7
B
60 68Right-handed alpha
Helix 17
AB8
B
82 86Right-handed 310
Helix 18
AB9
B
102 118Right-handed alpha
Helix 19
AC1
B
132 136Right-handed 310
Helix 20
AC2
B
150 159Right-handed alpha
Helix 21
AC3
B
179 186Right-handed alpha
Helix 22
AC4
B
187 196Right-handed alpha
Helix 23
AC5
B
214 220Right-handed alpha
Helix 24
AC6
B
254 266Right-handed alpha
Helix 25
AC7
B
274 278Right-handed 310
Helix 26
AC8
B
292 298Right-handed alpha
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There are 8 sheets in PDB entry 6FKT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
94 100anti-parallel
Strand 3
A
15 23anti-parallel
Strand 4
A
121 130anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
244 252anti-parallel
Strand 3
A
169 178anti-parallel
Strand 4
A
280 282anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 238first strand
Strand 2
A
244 252anti-parallel
Strand 3
A
169 178anti-parallel
Strand 4
A
286 290anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
226 227anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 59first strand
Strand 2
B
94 100anti-parallel
Strand 3
B
15 23anti-parallel
Strand 4
B
121 130anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 232first strand
Strand 2
B
244 252anti-parallel
Strand 3
B
169 178anti-parallel
Strand 4
B
280 282anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 238first strand
Strand 2
B
244 252anti-parallel
Strand 3
B
169 178anti-parallel
Strand 4
B
286 290anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
226 227anti-parallel
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