Analysis of interatomic Contacts of Structural Units in PDB entry:
6FKU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FKU entry

There are 2 chains in PDB entry 6FKU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 1MET 511
B
 ALA 4GLN 510
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6FKU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 68Right-handed alpha
Helix 2
AA2
A
70 101Right-handed alpha
Helix 3
AA3
A
103 125Right-handed alpha
Helix 4
AA4
A
162 175Right-handed alpha
Helix 5
AA5
A
187 201Right-handed alpha
Helix 6
AA6
A
218 226Right-handed alpha
Helix 7
AA7
A
227 230Right-handed 310
Helix 8
AA8
A
240 254Right-handed alpha
Helix 9
AA9
A
275 289Right-handed alpha
Helix 10
AB1
A
290 293Right-handed 310
Helix 11
AB2
A
307 321Right-handed alpha
Helix 12
AB3
A
340 358Right-handed alpha
Helix 13
AB4
A
398 403Right-handed alpha
Helix 14
AB5
A
417 426Right-handed alpha
Helix 15
AB6
A
440 451Right-handed alpha
Helix 16
AB7
A
474 478Right-handed 310
Helix 17
AB8
A
484 487Right-handed 310
Helix 18
AB9
A
488 492Right-handed alpha
Helix 19
AC1
B
48 68Right-handed alpha
Helix 20
AC2
B
70 101Right-handed alpha
Helix 21
AC3
B
103 125Right-handed alpha
Helix 22
AC4
B
162 175Right-handed alpha
Helix 23
AC5
B
187 202Right-handed alpha
Helix 24
AC6
B
218 226Right-handed alpha
Helix 25
AC7
B
227 230Right-handed 310
Helix 26
AC8
B
240 254Right-handed alpha
Helix 27
AC9
B
275 289Right-handed alpha
Helix 28
AD1
B
290 293Right-handed 310
Helix 29
AD2
B
307 321Right-handed alpha
Helix 30
AD3
B
340 358Right-handed alpha
Helix 31
AD4
B
398 403Right-handed alpha
Helix 32
AD5
B
417 426Right-handed alpha
Helix 33
AD6
B
440 451Right-handed alpha
Helix 34
AD7
B
474 478Right-handed 310
Helix 35
AD8
B
484 487Right-handed 310
Helix 36
AD9
B
488 492Right-handed alpha
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There are 10 sheets in PDB entry 6FKU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
10 13anti-parallel
Strand 3
A
40 45parallel
Strand 4
A
28 32anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
21 23anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
140 148anti-parallel
Strand 3
A
493 501anti-parallel
Strand 4
B
455 458parallel
Strand 5
B
435 437parallel
Strand 6
B
266 270parallel
Strand 7
B
298 304parallel
Strand 8
B
409 415parallel
Strand 9
B
390 393parallel
Strand 10
B
360 363anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
178 182parallel
Strand 3
A
151 155parallel
Strand 4
A
234 238parallel
Strand 5
A
259 261parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
390 393anti-parallel
Strand 3
A
409 415parallel
Strand 4
A
298 304parallel
Strand 5
A
266 270parallel
Strand 6
A
435 437parallel
Strand 7
A
455 458parallel
Strand 8
B
493 501parallel
Strand 9
B
140 148anti-parallel
Strand 10
B
132 134anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 325first strand
Strand 2
A
377 378parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
40 45parallel
Strand 3
B
28 32anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
21 23anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 210first strand
Strand 2
B
178 182parallel
Strand 3
B
151 155parallel
Strand 4
B
234 238parallel
Strand 5
B
259 261parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 325first strand
Strand 2
B
377 378parallel
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