Analysis of interatomic Contacts of Structural Units in PDB entry:
6FL9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FL9 entry

There are 4 chains in PDB entry 6FL9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	PHE 316
B	GLU 7	PHE 316
C	GLU 7	PHE 316
D	GLU 7	HIS 283

There are 41 helices in PDB entry 6FL9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	46	Right-handed 310
Helix 2	AA2	A	61	71	Right-handed alpha
Helix 3	AA3	A	195	202	Right-handed alpha
Helix 4	AA4	A	202	216	Right-handed alpha
Helix 5	AA5	A	217	220	Right-handed 310
Helix 6	AA6	A	221	245	Right-handed alpha
Helix 7	AA7	A	254	283	Right-handed alpha
Helix 8	AA8	A	285	316	Right-handed alpha
Helix 9	AA9	B	43	46	Right-handed 310
Helix 10	AB1	B	61	71	Right-handed alpha
Helix 11	AB2	B	118	122	Right-handed 310
Helix 12	AB3	B	195	202	Right-handed alpha
Helix 13	AB4	B	202	216	Right-handed alpha
Helix 14	AB5	B	217	220	Right-handed 310
Helix 15	AB6	B	221	245	Right-handed alpha
Helix 16	AB7	B	254	283	Right-handed alpha
Helix 17	AB8	B	285	316	Right-handed alpha
Helix 18	AB9	C	43	46	Right-handed 310
Helix 19	AC1	C	61	71	Right-handed alpha
Helix 20	AC2	C	195	202	Right-handed alpha
Helix 21	AC3	C	202	216	Right-handed alpha
Helix 22	AC4	C	217	220	Right-handed 310
Helix 23	AC5	C	221	245	Right-handed alpha
Helix 24	AC6	C	254	283	Right-handed alpha
Helix 25	AC7	C	285	316	Right-handed alpha
Helix 26	AC8	D	43	46	Right-handed 310
Helix 27	AC9	D	61	71	Right-handed alpha
Helix 28	AD1	D	195	202	Right-handed alpha
Helix 29	AD2	D	202	216	Right-handed alpha
Helix 30	AD3	D	217	220	Right-handed 310
Helix 31	AD4	D	221	245	Right-handed alpha
Helix 32	AD5	D	254	283	Right-handed alpha
Helix 33	AD6	D	285	316	Right-handed alpha
Helix 34	AD7	E	43	46	Right-handed 310
Helix 35	AD8	E	61	71	Right-handed alpha
Helix 36	AD9	E	195	202	Right-handed alpha
Helix 37	AE1	E	202	216	Right-handed alpha
Helix 38	AE2	E	217	220	Right-handed 310
Helix 39	AE3	E	221	245	Right-handed alpha
Helix 40	AE4	E	254	283	Right-handed alpha
Helix 41	AE5	E	285	316	Right-handed alpha

There are 15 sheets in PDB entry 6FL9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	60	first strand
Strand 2	A	83	97	anti-parallel
Strand 3	A	101	113	anti-parallel
Strand 4	A	29	41	anti-parallel
Strand 5	A	9	24	anti-parallel
Strand 6	A	142	146	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	60	first strand
Strand 2	A	83	97	anti-parallel
Strand 3	A	101	113	anti-parallel
Strand 4	A	29	41	anti-parallel
Strand 5	A	9	24	anti-parallel
Strand 6	A	152	153	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	80	first strand
Strand 2	A	126	135	anti-parallel
Strand 3	A	182	193	anti-parallel
Strand 4	A	162	174	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	60	first strand
Strand 2	B	83	97	anti-parallel
Strand 3	B	101	113	anti-parallel
Strand 4	B	29	41	anti-parallel
Strand 5	B	9	24	anti-parallel
Strand 6	B	142	146	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	60	first strand
Strand 2	B	83	97	anti-parallel
Strand 3	B	101	113	anti-parallel
Strand 4	B	29	41	anti-parallel
Strand 5	B	9	24	anti-parallel
Strand 6	B	152	153	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	126	135	anti-parallel
Strand 3	B	182	193	anti-parallel
Strand 4	B	162	174	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	60	first strand
Strand 2	C	83	97	anti-parallel
Strand 3	C	101	113	anti-parallel
Strand 4	C	29	41	anti-parallel
Strand 5	C	9	24	anti-parallel
Strand 6	C	142	146	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	60	first strand
Strand 2	C	83	97	anti-parallel
Strand 3	C	101	113	anti-parallel
Strand 4	C	29	41	anti-parallel
Strand 5	C	9	24	anti-parallel
Strand 6	C	152	153	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	126	135	anti-parallel
Strand 3	C	182	193	anti-parallel
Strand 4	C	162	174	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	60	first strand
Strand 2	D	83	97	anti-parallel
Strand 3	D	101	113	anti-parallel
Strand 4	D	29	41	anti-parallel
Strand 5	D	9	24	anti-parallel
Strand 6	D	142	146	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	60	first strand
Strand 2	D	83	97	anti-parallel
Strand 3	D	101	113	anti-parallel
Strand 4	D	29	41	anti-parallel
Strand 5	D	9	24	anti-parallel
Strand 6	D	152	153	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	80	first strand
Strand 2	D	126	135	anti-parallel
Strand 3	D	182	193	anti-parallel
Strand 4	D	162	174	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	60	first strand
Strand 2	E	83	97	anti-parallel
Strand 3	E	101	113	anti-parallel
Strand 4	E	29	41	anti-parallel
Strand 5	E	9	24	anti-parallel
Strand 6	E	142	146	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	60	first strand
Strand 2	E	83	97	anti-parallel
Strand 3	E	101	113	anti-parallel
Strand 4	E	29	41	anti-parallel
Strand 5	E	9	24	anti-parallel
Strand 6	E	152	153	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	80	first strand
Strand 2	E	126	135	anti-parallel
Strand 3	E	182	193	anti-parallel
Strand 4	E	162	174	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FL9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FL9