Analysis of interatomic Contacts of Structural Units in PDB entry:
6FLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FLK entry

There are 2 chains in PDB entry 6FLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 449MET 607
B
 PRO 449MET 607
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6FLK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
480 484Right-handed 310
Helix 2
AA2
A
517 528Right-handed alpha
Helix 3
AA3
A
552 559Right-handed 310
Helix 4
AA4
B
480 484Right-handed 310
Helix 5
AA5
B
517 528Right-handed alpha
Helix 6
AA6
B
552 559Right-handed 310
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There are 8 sheets in PDB entry 6FLK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 504first strand
Strand 2
A
452 465anti-parallel
Strand 3
A
509 516anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 504first strand
Strand 2
A
452 465anti-parallel
Strand 3
A
589 604anti-parallel
Strand 4
A
571 584anti-parallel
Strand 5
A
562 565anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
472 478anti-parallel
Strand 3
A
495 497anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
472 478anti-parallel
Strand 3
A
530 536anti-parallel
Strand 4
A
544 551anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 504first strand
Strand 2
B
452 465anti-parallel
Strand 3
B
509 516anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 504first strand
Strand 2
B
452 465anti-parallel
Strand 3
B
589 604anti-parallel
Strand 4
B
571 584anti-parallel
Strand 5
B
562 565anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 490first strand
Strand 2
B
472 478anti-parallel
Strand 3
B
495 497anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 490first strand
Strand 2
B
472 478anti-parallel
Strand 3
B
530 536anti-parallel
Strand 4
B
544 551anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il