Analysis of interatomic Contacts of Structural Units in PDB entry:
6FLO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FLO entry

There are 2 chains in PDB entry 6FLO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 211	LEU 489
B	TYR 219	LYS 490

There are 27 helices in PDB entry 6FLO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	212	218	Right-handed alpha
Helix 2	AA2	A	227	241	Right-handed alpha
Helix 3	AA3	A	242	245	Right-handed 310
Helix 4	AA4	A	248	258	Right-handed alpha
Helix 5	AA5	A	308	315	Right-handed alpha
Helix 6	AA6	A	336	343	Right-handed alpha
Helix 7	AA7	A	346	359	Right-handed alpha
Helix 8	AA8	A	360	365	Right-handed 310
Helix 9	AA9	A	368	377	Right-handed alpha
Helix 10	AB1	A	432	439	Right-handed alpha
Helix 11	AB2	A	461	467	Right-handed alpha
Helix 12	AB3	A	469	478	Right-handed alpha
Helix 13	AB4	A	479	481	Right-handed 310
Helix 14	AB5	A	482	489	Right-handed alpha
Helix 15	AB6	B	227	241	Right-handed alpha
Helix 16	AB7	B	242	245	Right-handed 310
Helix 17	AB8	B	248	259	Right-handed alpha
Helix 18	AB9	B	308	315	Right-handed alpha
Helix 19	AC1	B	336	343	Right-handed alpha
Helix 20	AC2	B	346	359	Right-handed alpha
Helix 21	AC3	B	360	365	Right-handed 310
Helix 22	AC4	B	368	378	Right-handed alpha
Helix 23	AC5	B	432	439	Right-handed alpha
Helix 24	AC6	B	461	467	Right-handed alpha
Helix 25	AC7	B	469	477	Right-handed alpha
Helix 26	AC8	B	478	481	Right-handed 310
Helix 27	AC9	B	482	490	Right-handed alpha

There are 8 sheets in PDB entry 6FLO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	265	first strand
Strand 2	A	328	335	anti-parallel
Strand 3	A	280	286	anti-parallel
Strand 4	A	306	307	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	321	324	anti-parallel
Strand 3	A	289	293	anti-parallel
Strand 4	A	296	301	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	384	first strand
Strand 2	A	452	458	anti-parallel
Strand 3	A	399	405	anti-parallel
Strand 4	A	430	431	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	391	first strand
Strand 2	A	445	448	anti-parallel
Strand 3	A	408	412	anti-parallel
Strand 4	A	420	425	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	260	265	first strand
Strand 2	B	328	335	anti-parallel
Strand 3	B	280	286	anti-parallel
Strand 4	B	306	307	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	271	first strand
Strand 2	B	321	324	anti-parallel
Strand 3	B	289	293	anti-parallel
Strand 4	B	296	301	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	384	first strand
Strand 2	B	452	458	anti-parallel
Strand 3	B	399	405	anti-parallel
Strand 4	B	430	431	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	391	first strand
Strand 2	B	445	448	anti-parallel
Strand 3	B	408	413	anti-parallel
Strand 4	B	419	425	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FLO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FLO