Analysis of interatomic Contacts of Structural Units in PDB entry:
6FM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FM6 entry

There is 1 chain in PDB entry 6FM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4PRO 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6FM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 22Right-handed alpha
Helix 2
AA2
A
63 78Right-handed alpha
Helix 3
AA3
A
86 95Right-handed 310
Helix 4
AA4
A
97 101Right-handed 310
Helix 5
AA5
A
103 109Right-handed alpha
Helix 6
AA6
A
125 136Right-handed alpha
Helix 7
AA7
A
149 164Right-handed alpha
Helix 8
AA8
A
167 175Right-handed alpha
Helix 9
AA9
A
175 180Right-handed alpha
Helix 10
AB1
A
190 197Right-handed 310
Helix 11
AB2
A
215 221Right-handed alpha
Helix 12
AB3
A
226 239Right-handed alpha
Helix 13
AB4
A
242 252Right-handed alpha
Helix 14
AB5
A
276 284Right-handed alpha
Helix 15
AB6
A
285 290Right-handed alpha
Helix 16
AB7
A
327 330Right-handed 310
Helix 17
AB8
A
342 358Right-handed alpha
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There are 5 sheets in PDB entry 6FM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 42first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
331 337anti-parallel
Strand 4
A
319 326anti-parallel
Strand 5
A
308 316anti-parallel
Strand 6
A
269 272anti-parallel
Strand 7
A
262 264anti-parallel
Strand 8
A
257 259anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
223 225anti-parallel
Strand 3
A
185 186anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
293 294anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
207 208anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
302 303anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il