Analysis of interatomic Contacts of Structural Units in PDB entry:
6FME


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FME entry

There are 2 chains in PDB entry 6FME (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 0ALA 504
A
 ALA 0ALA 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6FME. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
18 30Right-handed alpha
Helix 2
AA2
B
67 75Right-handed alpha
Helix 3
AA3
B
93 103Right-handed alpha
Helix 4
AA4
B
104 106Right-handed 310
Helix 5
AA5
B
108 112Right-handed 310
Helix 6
AA6
B
114 119Right-handed alpha
Helix 7
AA7
B
124 130Right-handed alpha
Helix 8
AA8
B
167 184Right-handed alpha
Helix 9
AA9
B
193 197Right-handed 310
Helix 10
AB1
B
208 225Right-handed alpha
Helix 11
AB2
B
236 245Right-handed alpha
Helix 12
AB3
B
254 266Right-handed alpha
Helix 13
AB4
B
268 278Right-handed alpha
Helix 14
AB5
B
293 298Right-handed 310
Helix 15
AB6
B
311 326Right-handed alpha
Helix 16
AB7
B
328 334Right-handed alpha
Helix 17
AB8
B
335 338Right-handed 310
Helix 18
AB9
B
349 354Right-handed alpha
Helix 19
AC1
B
357 371Right-handed alpha
Helix 20
AC2
B
379 383Right-handed alpha
Helix 21
AC3
B
388 396Right-handed alpha
Helix 22
AC4
B
397 403Right-handed 310
Helix 23
AC5
B
407 415Right-handed alpha
Helix 24
AC6
B
417 433Right-handed alpha
Helix 25
AC7
B
434 438Right-handed 310
Helix 26
AC8
B
467 471Right-handed 310
Helix 27
AC9
A
18 30Right-handed alpha
Helix 28
AD1
A
67 76Right-handed alpha
Helix 29
AD2
A
93 103Right-handed alpha
Helix 30
AD3
A
104 106Right-handed 310
Helix 31
AD4
A
108 112Right-handed 310
Helix 32
AD5
A
114 119Right-handed alpha
Helix 33
AD6
A
124 130Right-handed alpha
Helix 34
AD7
A
167 184Right-handed alpha
Helix 35
AD8
A
193 197Right-handed 310
Helix 36
AD9
A
208 225Right-handed alpha
Helix 37
AE1
A
236 245Right-handed alpha
Helix 38
AE2
A
254 266Right-handed alpha
Helix 39
AE3
A
268 278Right-handed alpha
Helix 40
AE4
A
293 298Right-handed 310
Helix 41
AE5
A
311 326Right-handed alpha
Helix 42
AE6
A
328 334Right-handed alpha
Helix 43
AE7
A
335 338Right-handed 310
Helix 44
AE8
A
349 354Right-handed alpha
Helix 45
AE9
A
357 371Right-handed alpha
Helix 46
AF1
A
379 383Right-handed alpha
Helix 47
AF2
A
388 396Right-handed alpha
Helix 48
AF3
A
397 403Right-handed 310
Helix 49
AF4
A
407 415Right-handed alpha
Helix 50
AF5
A
417 433Right-handed alpha
Helix 51
AF6
A
434 438Right-handed 310
Helix 52
AF7
A
467 471Right-handed 310
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There are 10 sheets in PDB entry 6FME. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
36 39parallel
Strand 3
B
79 84parallel
Strand 4
B
188 191parallel
Strand 5
B
228 231parallel
Strand 6
B
249 252parallel
Strand 7
B
282 284parallel
Strand 8
B
374 378parallel
Strand 9
B
6 9parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
57 61anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 90first strand
Strand 2
B
160 162anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 145first strand
Strand 2
B
148 153anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 445first strand
Strand 2
B
449 455anti-parallel
Strand 3
B
460 465anti-parallel
Strand 4
B
480 486anti-parallel
Strand 5
B
489 493anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
36 39parallel
Strand 3
A
79 85parallel
Strand 4
A
188 192parallel
Strand 5
A
228 231parallel
Strand 6
A
249 252parallel
Strand 7
A
282 284parallel
Strand 8
A
374 378parallel
Strand 9
A
6 9parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
57 61anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
160 162anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 145first strand
Strand 2
A
148 153anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 445first strand
Strand 2
A
449 455anti-parallel
Strand 3
A
460 465anti-parallel
Strand 4
A
480 486anti-parallel
Strand 5
A
489 493anti-parallel
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