Analysis of interatomic Contacts of Structural Units in PDB entry:
6FMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FMG entry

There are 4 chains in PDB entry 6FMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0PRO 139
B
 MET 0PRO 139
C
 MET 0PRO 139
D
 MET 0PRO 139
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6FMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 26Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
71 84Right-handed alpha
Helix 4
AA4
A
96 110Right-handed alpha
Helix 5
AA5
A
114 129Right-handed alpha
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
B
12 25Right-handed alpha
Helix 8
AA8
B
43 54Right-handed alpha
Helix 9
AA9
B
70 84Right-handed alpha
Helix 10
AB1
B
96 110Right-handed alpha
Helix 11
AB2
B
114 129Right-handed alpha
Helix 12
AB3
B
134 138Right-handed 310
Helix 13
AB4
C
12 26Right-handed alpha
Helix 14
AB5
C
41 56Right-handed alpha
Helix 15
AB6
C
70 84Right-handed alpha
Helix 16
AB7
C
96 110Right-handed alpha
Helix 17
AB8
C
114 129Right-handed alpha
Helix 18
AB9
C
134 138Right-handed 310
Helix 19
AC1
D
12 25Right-handed alpha
Helix 20
AC2
D
41 55Right-handed alpha
Helix 21
AC3
D
70 83Right-handed alpha
Helix 22
AC4
D
96 111Right-handed alpha
Helix 23
AC5
D
114 129Right-handed alpha
Helix 24
AC6
D
134 138Right-handed 310
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There are 4 sheets in PDB entry 6FMG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
3 10parallel
Strand 3
A
61 66parallel
Strand 4
A
89 92parallel
Strand 5
D
132 133anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
D
89 93anti-parallel
Strand 3
D
61 66parallel
Strand 4
D
3 10parallel
Strand 5
D
31 36parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
3 10parallel
Strand 3
B
61 66parallel
Strand 4
B
89 92parallel
Strand 5
C
132 133anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
C
89 92anti-parallel
Strand 3
C
61 66parallel
Strand 4
C
3 10parallel
Strand 5
C
31 36parallel
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