Analysis of interatomic Contacts of Structural Units in PDB entry:
6FN6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FN6 entry

There is 1 chain in PDB entry 6FN6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 893	VAL 1540

There are 78 helices in PDB entry 6FN6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	905	909	Right-handed 310
Helix 2	AA2	A	920	936	Right-handed alpha
Helix 3	AA3	A	939	943	Right-handed 310
Helix 4	AA4	A	1018	1028	Right-handed alpha
Helix 5	AA5	A	1034	1037	Right-handed 310
Helix 6	AA6	A	1056	1071	Right-handed alpha
Helix 7	AA7	A	1089	1098	Right-handed alpha
Helix 8	AA8	A	1103	1108	Right-handed alpha
Helix 9	AA9	A	1165	1184	Right-handed alpha
Helix 10	AB1	A	1206	1217	Right-handed alpha
Helix 11	AB2	A	1232	1241	Right-handed alpha
Helix 12	AB3	A	1275	1283	Right-handed alpha
Helix 13	AB4	A	1297	1303	Right-handed alpha
Helix 14	AB5	A	1303	1311	Right-handed alpha
Helix 15	AB6	A	1352	1368	Right-handed alpha
Helix 16	AB7	A	1382	1392	Right-handed alpha
Helix 17	AB8	A	1395	1397	Right-handed 310
Helix 18	AB9	A	1416	1424	Right-handed alpha
Helix 19	AC1	A	1466	1468	Right-handed 310
Helix 20	AC2	A	1499	1508	Right-handed alpha
Helix 21	AC3	A	1568	1573	Right-handed alpha
Helix 22	AC4	A	1575	1587	Right-handed alpha
Helix 23	AC5	A	1605	1619	Right-handed alpha
Helix 24	AC6	A	1628	1639	Right-handed alpha
Helix 25	AC7	A	1643	1645	Right-handed 310
Helix 26	AC8	A	1654	1663	Right-handed alpha
Helix 27	AC9	A	1677	1685	Right-handed alpha
Helix 28	AD1	A	1698	1704	Right-handed alpha
Helix 29	AD2	A	1710	1715	Right-handed 310
Helix 30	AD3	A	1722	1729	Right-handed alpha
Helix 31	AD4	A	1730	1748	Right-handed alpha
Helix 32	AD5	A	1762	1773	Right-handed alpha
Helix 33	AD6	A	1821	1834	Right-handed alpha
Helix 34	AD7	A	1849	1862	Right-handed alpha
Helix 35	AD8	A	1875	1890	Right-handed alpha
Helix 36	AD9	A	1921	1937	Right-handed alpha
Helix 37	AE1	A	1959	1978	Right-handed alpha
Helix 38	AE2	A	2031	2042	Right-handed alpha
Helix 39	AE3	B	905	909	Right-handed 310
Helix 40	AE4	B	920	937	Right-handed alpha
Helix 41	AE5	B	939	943	Right-handed 310
Helix 42	AE6	B	1018	1029	Right-handed alpha
Helix 43	AE7	B	1034	1037	Right-handed 310
Helix 44	AE8	B	1056	1072	Right-handed alpha
Helix 45	AE9	B	1089	1098	Right-handed alpha
Helix 46	AF1	B	1101	1108	Right-handed alpha
Helix 47	AF2	B	1165	1184	Right-handed alpha
Helix 48	AF3	B	1201	1205	Right-handed 310
Helix 49	AF4	B	1206	1217	Right-handed alpha
Helix 50	AF5	B	1232	1241	Right-handed alpha
Helix 51	AF6	B	1275	1283	Right-handed alpha
Helix 52	AF7	B	1297	1303	Right-handed alpha
Helix 53	AF8	B	1303	1311	Right-handed alpha
Helix 54	AF9	B	1352	1368	Right-handed alpha
Helix 55	AG1	B	1382	1392	Right-handed alpha
Helix 56	AG2	B	1395	1397	Right-handed 310
Helix 57	AG3	B	1416	1424	Right-handed alpha
Helix 58	AG4	B	1466	1468	Right-handed 310
Helix 59	AG5	B	1499	1508	Right-handed alpha
Helix 60	AG6	B	1517	1521	Right-handed 310
Helix 61	AG7	B	1568	1573	Right-handed alpha
Helix 62	AG8	B	1575	1587	Right-handed alpha
Helix 63	AG9	B	1605	1619	Right-handed alpha
Helix 64	AH1	B	1628	1639	Right-handed alpha
Helix 65	AH2	B	1643	1645	Right-handed 310
Helix 66	AH3	B	1654	1663	Right-handed alpha
Helix 67	AH4	B	1677	1686	Right-handed alpha
Helix 68	AH5	B	1698	1703	Right-handed alpha
Helix 69	AH6	B	1710	1715	Right-handed 310
Helix 70	AH7	B	1722	1729	Right-handed alpha
Helix 71	AH8	B	1730	1748	Right-handed alpha
Helix 72	AH9	B	1762	1773	Right-handed alpha
Helix 73	AI1	B	1821	1834	Right-handed alpha
Helix 74	AI2	B	1849	1862	Right-handed alpha
Helix 75	AI3	B	1875	1890	Right-handed alpha
Helix 76	AI4	B	1921	1937	Right-handed alpha
Helix 77	AI5	B	1959	1978	Right-handed alpha
Helix 78	AI6	B	2031	2043	Right-handed alpha

There are 18 sheets in PDB entry 6FN6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	894	899	first strand
Strand 2	A	963	970	anti-parallel
Strand 3	A	976	980	anti-parallel
Strand 4	A	985	992	anti-parallel
Strand 5	A	945	952	anti-parallel
Strand 6	A	1078	1088	anti-parallel
Strand 7	A	1126	1135	anti-parallel
Strand 8	A	1120	1123	anti-parallel
Strand 9	A	1110	1115	anti-parallel
Strand 10	A	1048	1051	anti-parallel
Strand 11	A	1039	1042	anti-parallel
Strand 12	A	1016	1017	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	957	958	first strand
Strand 2	A	916	918	anti-parallel
Strand 3	A	911	913	anti-parallel
Strand 4	A	1030	1032	anti-parallel

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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1341	1344	first strand
Strand 2	A	1370	1376	parallel
Strand 3	A	1399	1404	parallel
Strand 4	A	1429	1433	parallel
Strand 5	A	1436	1444	anti-parallel
Strand 6	A	1144	1155	anti-parallel
Strand 7	A	2049	2055	anti-parallel
Strand 8	A	1983	1986	parallel
Strand 9	A	1942	1947	parallel
Strand 10	A	1892	1898	parallel
Strand 11	A	1813	1817	parallel
Strand 12	A	1838	1842	parallel
Strand 13	A	1865	1869	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1157	1158	first strand
Strand 2	A	1313	1320	parallel
Strand 3	A	1325	1332	anti-parallel
Strand 4	A	1285	1296	anti-parallel
Strand 5	A	1261	1267	parallel
Strand 6	A	1190	1196	parallel
Strand 7	A	1221	1228	parallel
Strand 8	A	1246	1249	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1452	1454	first strand
Strand 2	A	1800	1802	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1457	1461	first strand
Strand 2	A	1470	1474	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1552	1556	first strand
Strand 2	A	1488	1498	anti-parallel
Strand 3	A	1529	1533	anti-parallel
Strand 4	A	1539	1543	anti-parallel
Strand 5	A	1560	1562	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1552	1556	first strand
Strand 2	A	1488	1498	anti-parallel
Strand 3	A	1778	1782	anti-parallel
Strand 4	A	1755	1759	parallel

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There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1647	1649	first strand
Strand 2	A	1621	1626	parallel
Strand 3	A	1597	1600	parallel
Strand 4	A	1668	1673	parallel
Strand 5	A	1687	1695	parallel
Strand 6	A	1717	1720	parallel
Strand 7	B	1717	1720	anti-parallel
Strand 8	B	1687	1695	parallel
Strand 9	B	1668	1673	parallel
Strand 10	B	1597	1600	parallel
Strand 11	B	1621	1626	parallel
Strand 12	B	1647	1649	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1706	1708	first strand
Strand 2	B	1706	1708	anti-parallel

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There are 12 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	894	899	first strand
Strand 2	B	963	970	anti-parallel
Strand 3	B	976	981	anti-parallel
Strand 4	B	984	992	anti-parallel
Strand 5	B	945	952	anti-parallel
Strand 6	B	1078	1088	anti-parallel
Strand 7	B	1126	1135	anti-parallel
Strand 8	B	1120	1123	anti-parallel
Strand 9	B	1110	1115	anti-parallel
Strand 10	B	1048	1051	anti-parallel
Strand 11	B	1039	1042	anti-parallel
Strand 12	B	1016	1017	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	957	958	first strand
Strand 2	B	916	918	anti-parallel
Strand 3	B	911	913	anti-parallel
Strand 4	B	1030	1032	anti-parallel

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There are 13 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1341	1344	first strand
Strand 2	B	1370	1376	parallel
Strand 3	B	1399	1404	parallel
Strand 4	B	1429	1433	parallel
Strand 5	B	1436	1444	anti-parallel
Strand 6	B	1147	1155	anti-parallel
Strand 7	B	2049	2053	anti-parallel
Strand 8	B	1983	1987	parallel
Strand 9	B	1942	1948	parallel
Strand 10	B	1891	1898	parallel
Strand 11	B	1812	1817	parallel
Strand 12	B	1838	1842	parallel
Strand 13	B	1865	1869	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1157	1158	first strand
Strand 2	B	1313	1320	parallel
Strand 3	B	1325	1332	anti-parallel
Strand 4	B	1285	1296	anti-parallel
Strand 5	B	1261	1267	parallel
Strand 6	B	1190	1196	parallel
Strand 7	B	1221	1227	parallel
Strand 8	B	1246	1248	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1452	1454	first strand
Strand 2	B	1800	1802	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1457	1461	first strand
Strand 2	B	1470	1474	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1552	1556	first strand
Strand 2	B	1488	1498	anti-parallel
Strand 3	B	1529	1533	anti-parallel
Strand 4	B	1539	1543	anti-parallel
Strand 5	B	1560	1562	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1552	1556	first strand
Strand 2	B	1488	1498	anti-parallel
Strand 3	B	1778	1782	anti-parallel
Strand 4	B	1755	1759	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FN6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FN6