Analysis of interatomic Contacts of Structural Units in PDB entry:
6FNW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FNW entry

There is 1 chain in PDB entry 6FNW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 397GLU 808
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6FNW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
397 411Right-handed alpha
Helix 2
AA2
A
412 420Right-handed alpha
Helix 3
AA3
A
439 445Right-handed 310
Helix 4
AA4
A
462 468Right-handed 310
Helix 5
AA5
A
484 495Right-handed alpha
Helix 6
AA6
A
504 508Right-handed 310
Helix 7
AA7
A
509 515Right-handed 310
Helix 8
AA8
A
534 539Right-handed alpha
Helix 9
AA9
A
540 543Right-handed 310
Helix 10
AB1
A
559 565Right-handed alpha
Helix 11
AB2
A
566 568Right-handed 310
Helix 12
AB3
A
585 590Right-handed 310
Helix 13
AB4
A
607 613Right-handed 310
Helix 14
AB5
A
629 638Right-handed 310
Helix 15
AB6
A
655 661Right-handed 310
Helix 16
AB7
A
678 684Right-handed 310
Helix 17
AB8
A
701 707Right-handed 310
Helix 18
AB9
A
724 730Right-handed 310
Helix 19
AC1
A
747 753Right-handed 310
Helix 20
AC2
A
770 776Right-handed 310
Helix 21
AC3
A
780 782Right-handed 310
Helix 22
AC4
A
787 793Right-handed alpha
Helix 23
AC5
A
795 808Right-handed alpha
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There are 2 sheets in PDB entry 6FNW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 17 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
428 433anti-parallel
Strand 3
A
450 454parallel
Strand 4
A
473 477parallel
Strand 5
A
497 501parallel
Strand 6
A
520 524parallel
Strand 7
A
548 552parallel
Strand 8
A
571 575parallel
Strand 9
A
595 599parallel
Strand 10
A
618 620parallel
Strand 11
A
643 645parallel
Strand 12
A
666 668parallel
Strand 13
A
689 691parallel
Strand 14
A
712 714parallel
Strand 15
A
735 737parallel
Strand 16
A
758 760parallel
Strand 17
A
784 785parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 461first strand
Strand 2
A
481 483parallel
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