Analysis of interatomic Contacts of Structural Units in PDB entry:
6FNY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FNY entry

There are 8 chains in PDB entry 6FNY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -2	GLU 512
B	GLY -2	GLU 512
C	PRO 0	GLU 512
D	THR 3	GLU 512
E	THR 3	GLU 512
F	GLY 4	GLU 512
G	GLY 4	GLU 512
H	PRO 0	GLU 512

There are179 helices in PDB entry 6FNY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	21	Right-handed 310
Helix 2	AA2	A	31	39	Right-handed alpha
Helix 3	AA3	A	53	64	Right-handed alpha
Helix 4	AA4	A	66	71	Right-handed alpha
Helix 5	AA5	A	85	93	Right-handed alpha
Helix 6	AA6	A	147	152	Right-handed alpha
Helix 7	AA7	A	159	181	Right-handed alpha
Helix 8	AA8	A	207	212	Right-handed alpha
Helix 9	AA9	A	213	215	Right-handed 310
Helix 10	AB1	A	228	232	Right-handed 310
Helix 11	AB2	A	233	243	Right-handed alpha
Helix 12	AB3	A	244	248	Right-handed 310
Helix 13	AB4	A	251	283	Right-handed alpha
Helix 14	AB5	A	302	306	Right-handed 310
Helix 15	AB6	A	313	318	Right-handed alpha
Helix 16	AB7	A	341	350	Right-handed alpha
Helix 17	AB8	A	353	361	Right-handed 310
Helix 18	AB9	A	366	371	Right-handed alpha
Helix 19	AC1	A	431	449	Right-handed alpha
Helix 20	AC2	A	450	473	Right-handed alpha
Helix 21	AC3	A	487	491	Right-handed 310
Helix 22	AC4	A	498	507	Right-handed alpha
Helix 23	AC5	B	17	21	Right-handed 310
Helix 24	AC6	B	31	41	Right-handed alpha
Helix 25	AC7	B	53	64	Right-handed alpha
Helix 26	AC8	B	66	71	Right-handed alpha
Helix 27	AC9	B	85	93	Right-handed alpha
Helix 28	AD1	B	147	152	Right-handed alpha
Helix 29	AD2	B	159	181	Right-handed alpha
Helix 30	AD3	B	207	212	Right-handed alpha
Helix 31	AD4	B	213	215	Right-handed 310
Helix 32	AD5	B	228	232	Right-handed 310
Helix 33	AD6	B	233	243	Right-handed alpha
Helix 34	AD7	B	244	248	Right-handed 310
Helix 35	AD8	B	251	283	Right-handed alpha
Helix 36	AD9	B	285	287	Right-handed 310
Helix 37	AE1	B	302	306	Right-handed 310
Helix 38	AE2	B	313	318	Right-handed alpha
Helix 39	AE3	B	341	350	Right-handed alpha
Helix 40	AE4	B	353	361	Right-handed 310
Helix 41	AE5	B	366	371	Right-handed alpha
Helix 42	AE6	B	431	449	Right-handed alpha
Helix 43	AE7	B	450	473	Right-handed alpha
Helix 44	AE8	B	487	491	Right-handed 310
Helix 45	AE9	B	498	507	Right-handed alpha
Helix 46	AF1	C	17	21	Right-handed 310
Helix 47	AF2	C	31	40	Right-handed alpha
Helix 48	AF3	C	53	64	Right-handed alpha
Helix 49	AF4	C	66	71	Right-handed alpha
Helix 50	AF5	C	85	93	Right-handed alpha
Helix 51	AF6	C	147	152	Right-handed alpha
Helix 52	AF7	C	159	181	Right-handed alpha
Helix 53	AF8	C	207	212	Right-handed alpha
Helix 54	AF9	C	213	215	Right-handed 310
Helix 55	AG1	C	228	232	Right-handed 310
Helix 56	AG2	C	233	243	Right-handed alpha
Helix 57	AG3	C	244	248	Right-handed 310
Helix 58	AG4	C	251	283	Right-handed alpha
Helix 59	AG5	C	302	306	Right-handed 310
Helix 60	AG6	C	313	318	Right-handed alpha
Helix 61	AG7	C	341	350	Right-handed alpha
Helix 62	AG8	C	353	361	Right-handed 310
Helix 63	AG9	C	366	371	Right-handed alpha
Helix 64	AH1	C	431	449	Right-handed alpha
Helix 65	AH2	C	450	473	Right-handed alpha
Helix 66	AH3	C	487	491	Right-handed 310
Helix 67	AH4	C	498	506	Right-handed alpha
Helix 68	AH5	D	17	21	Right-handed 310
Helix 69	AH6	D	31	41	Right-handed alpha
Helix 70	AH7	D	53	64	Right-handed alpha
Helix 71	AH8	D	66	71	Right-handed alpha
Helix 72	AH9	D	85	93	Right-handed alpha
Helix 73	AI1	D	126	130	Right-handed 310
Helix 74	AI2	D	147	152	Right-handed alpha
Helix 75	AI3	D	159	181	Right-handed alpha
Helix 76	AI4	D	207	212	Right-handed alpha
Helix 77	AI5	D	213	215	Right-handed 310
Helix 78	AI6	D	228	232	Right-handed 310
Helix 79	AI7	D	233	242	Right-handed alpha
Helix 80	AI8	D	243	248	Right-handed 310
Helix 81	AI9	D	251	283	Right-handed alpha
Helix 82	AJ1	D	302	306	Right-handed 310
Helix 83	AJ2	D	313	318	Right-handed alpha
Helix 84	AJ3	D	341	350	Right-handed alpha
Helix 85	AJ4	D	353	361	Right-handed 310
Helix 86	AJ5	D	366	371	Right-handed alpha
Helix 87	AJ6	D	431	449	Right-handed alpha
Helix 88	AJ7	D	450	473	Right-handed alpha
Helix 89	AJ8	D	487	491	Right-handed 310
Helix 90	AJ9	D	498	506	Right-handed alpha
Helix 91	AK1	E	17	21	Right-handed 310
Helix 92	AK2	E	31	41	Right-handed alpha
Helix 93	AK3	E	54	64	Right-handed alpha
Helix 94	AK4	E	66	71	Right-handed alpha
Helix 95	AK5	E	85	93	Right-handed alpha
Helix 96	AK6	E	147	152	Right-handed alpha
Helix 97	AK7	E	159	181	Right-handed alpha
Helix 98	AK8	E	207	213	Right-handed alpha
Helix 99	AK9	E	228	232	Right-handed 310
Helix 100	AL1	E	233	243	Right-handed alpha
Helix 101	AL2	E	244	248	Right-handed 310
Helix 102	AL3	E	251	283	Right-handed alpha
Helix 103	AL4	E	302	306	Right-handed 310
Helix 104	AL5	E	313	318	Right-handed alpha
Helix 105	AL6	E	341	350	Right-handed alpha
Helix 106	AL7	E	353	361	Right-handed 310
Helix 107	AL8	E	366	371	Right-handed alpha
Helix 108	AL9	E	431	449	Right-handed alpha
Helix 109	AM1	E	450	473	Right-handed alpha
Helix 110	AM2	E	487	491	Right-handed 310
Helix 111	AM3	E	498	507	Right-handed alpha
Helix 112	AM4	F	17	21	Right-handed 310
Helix 113	AM5	F	31	41	Right-handed alpha
Helix 114	AM6	F	53	64	Right-handed alpha
Helix 115	AM7	F	66	71	Right-handed alpha
Helix 116	AM8	F	85	93	Right-handed alpha
Helix 117	AM9	F	147	152	Right-handed alpha
Helix 118	AN1	F	159	181	Right-handed alpha
Helix 119	AN2	F	207	212	Right-handed alpha
Helix 120	AN3	F	213	215	Right-handed 310
Helix 121	AN4	F	228	232	Right-handed 310
Helix 122	AN5	F	233	243	Right-handed alpha
Helix 123	AN6	F	244	248	Right-handed 310
Helix 124	AN7	F	251	283	Right-handed alpha
Helix 125	AN8	F	302	306	Right-handed 310
Helix 126	AN9	F	313	318	Right-handed alpha
Helix 127	AO1	F	341	350	Right-handed alpha
Helix 128	AO2	F	353	361	Right-handed 310
Helix 129	AO3	F	366	371	Right-handed alpha
Helix 130	AO4	F	431	449	Right-handed alpha
Helix 131	AO5	F	450	473	Right-handed alpha
Helix 132	AO6	F	487	491	Right-handed 310
Helix 133	AO7	F	498	506	Right-handed alpha
Helix 134	AO8	G	17	21	Right-handed 310
Helix 135	AO9	G	31	41	Right-handed alpha
Helix 136	AP1	G	53	64	Right-handed alpha
Helix 137	AP2	G	66	71	Right-handed alpha
Helix 138	AP3	G	85	93	Right-handed alpha
Helix 139	AP4	G	147	152	Right-handed alpha
Helix 140	AP5	G	159	182	Right-handed alpha
Helix 141	AP6	G	183	185	Right-handed 310
Helix 142	AP7	G	207	212	Right-handed alpha
Helix 143	AP8	G	213	215	Right-handed 310
Helix 144	AP9	G	228	232	Right-handed 310
Helix 145	AQ1	G	233	243	Right-handed alpha
Helix 146	AQ2	G	244	248	Right-handed 310
Helix 147	AQ3	G	251	283	Right-handed alpha
Helix 148	AQ4	G	302	306	Right-handed 310
Helix 149	AQ5	G	313	318	Right-handed alpha
Helix 150	AQ6	G	341	350	Right-handed alpha
Helix 151	AQ7	G	353	358	Right-handed alpha
Helix 152	AQ8	G	359	361	Right-handed 310
Helix 153	AQ9	G	366	371	Right-handed alpha
Helix 154	AR1	G	431	449	Right-handed alpha
Helix 155	AR2	G	450	473	Right-handed alpha
Helix 156	AR3	G	487	491	Right-handed 310
Helix 157	AR4	G	498	507	Right-handed alpha
Helix 158	AR5	H	17	21	Right-handed 310
Helix 159	AR6	H	31	41	Right-handed alpha
Helix 160	AR7	H	53	64	Right-handed alpha
Helix 161	AR8	H	66	71	Right-handed alpha
Helix 162	AR9	H	85	93	Right-handed alpha
Helix 163	AS1	H	147	152	Right-handed alpha
Helix 164	AS2	H	159	181	Right-handed alpha
Helix 165	AS3	H	207	212	Right-handed alpha
Helix 166	AS4	H	213	215	Right-handed 310
Helix 167	AS5	H	228	232	Right-handed 310
Helix 168	AS6	H	233	243	Right-handed alpha
Helix 169	AS7	H	244	248	Right-handed 310
Helix 170	AS8	H	251	283	Right-handed alpha
Helix 171	AS9	H	302	306	Right-handed 310
Helix 172	AT1	H	313	318	Right-handed alpha
Helix 173	AT2	H	341	350	Right-handed alpha
Helix 174	AT3	H	353	361	Right-handed 310
Helix 175	AT4	H	366	371	Right-handed alpha
Helix 176	AT5	H	431	449	Right-handed alpha
Helix 177	AT6	H	450	473	Right-handed alpha
Helix 178	AT7	H	487	491	Right-handed 310
Helix 179	AT8	H	498	506	Right-handed alpha

There are 32 sheets in PDB entry 6FNY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	96	101	parallel
Strand 3	A	191	196	parallel
Strand 4	A	7	13	parallel
Strand 5	A	289	295	parallel
Strand 6	A	321	324	anti-parallel
Strand 7	A	42	44	anti-parallel
Strand 8	A	331	333	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	48	first strand
Strand 2	A	337	338	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	205	206	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	379	383	first strand
Strand 2	A	392	397	anti-parallel
Strand 3	A	400	405	anti-parallel
Strand 4	A	411	414	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	117	first strand
Strand 2	B	96	101	parallel
Strand 3	B	191	196	parallel
Strand 4	B	7	13	parallel
Strand 5	B	289	295	parallel
Strand 6	B	321	324	anti-parallel
Strand 7	B	42	44	anti-parallel
Strand 8	B	331	333	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	337	338	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	205	206	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	379	383	first strand
Strand 2	B	392	397	anti-parallel
Strand 3	B	400	405	anti-parallel
Strand 4	B	408	414	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	96	101	parallel
Strand 3	C	191	196	parallel
Strand 4	C	7	13	parallel
Strand 5	C	289	295	parallel
Strand 6	C	321	324	anti-parallel
Strand 7	C	42	44	anti-parallel
Strand 8	C	331	333	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	48	first strand
Strand 2	C	337	338	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	205	206	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	379	383	first strand
Strand 2	C	392	397	anti-parallel
Strand 3	C	400	405	anti-parallel
Strand 4	C	411	414	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	96	101	parallel
Strand 3	D	191	196	parallel
Strand 4	D	7	13	parallel
Strand 5	D	289	295	parallel
Strand 6	D	322	324	anti-parallel
Strand 7	D	42	44	anti-parallel
Strand 8	D	331	333	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	337	338	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	155	first strand
Strand 2	D	205	206	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	379	383	first strand
Strand 2	D	392	397	anti-parallel
Strand 3	D	400	405	anti-parallel
Strand 4	D	411	414	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	117	first strand
Strand 2	E	96	101	parallel
Strand 3	E	191	196	parallel
Strand 4	E	7	13	parallel
Strand 5	E	289	295	parallel
Strand 6	E	321	324	anti-parallel
Strand 7	E	42	44	anti-parallel
Strand 8	E	331	333	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	48	first strand
Strand 2	E	337	338	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	154	155	first strand
Strand 2	E	205	206	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	379	383	first strand
Strand 2	E	392	397	anti-parallel
Strand 3	E	400	405	anti-parallel
Strand 4	E	411	414	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	117	first strand
Strand 2	F	96	101	parallel
Strand 3	F	191	196	parallel
Strand 4	F	7	13	parallel
Strand 5	F	289	295	parallel
Strand 6	F	321	324	anti-parallel
Strand 7	F	42	44	anti-parallel
Strand 8	F	331	333	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	48	first strand
Strand 2	F	337	338	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	154	155	first strand
Strand 2	F	205	206	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	379	383	first strand
Strand 2	F	392	397	anti-parallel
Strand 3	F	400	405	anti-parallel
Strand 4	F	408	414	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	117	first strand
Strand 2	G	96	101	parallel
Strand 3	G	191	196	parallel
Strand 4	G	7	13	parallel
Strand 5	G	289	295	parallel
Strand 6	G	321	324	anti-parallel
Strand 7	G	42	44	anti-parallel
Strand 8	G	331	333	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	48	first strand
Strand 2	G	337	338	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	154	155	first strand
Strand 2	G	205	206	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	379	383	first strand
Strand 2	G	392	397	anti-parallel
Strand 3	G	400	405	anti-parallel
Strand 4	G	408	414	anti-parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	116	117	first strand
Strand 2	H	96	101	parallel
Strand 3	H	191	197	parallel
Strand 4	H	7	13	parallel
Strand 5	H	289	295	parallel
Strand 6	H	322	324	anti-parallel
Strand 7	H	42	44	anti-parallel
Strand 8	H	331	333	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	48	first strand
Strand 2	H	337	338	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	154	155	first strand
Strand 2	H	205	206	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	379	383	first strand
Strand 2	H	392	397	anti-parallel
Strand 3	H	400	405	anti-parallel
Strand 4	H	408	414	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FNY

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FNY