Analysis of interatomic Contacts of Structural Units in PDB entry:
6FNZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FNZ entry

There are 7 chains in PDB entry 6FNZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 258PRO 335
B
 LYS 255PRO 335
C
 ARG 259PRO 335
D
 PHE 257PRO 335
E
 PRO 0GLY 5
F
 PRO 0GLY 5
G
 PRO 0GLY 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6FNZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
287 302Right-handed alpha
Helix 2
AA2
A
319 324Right-handed alpha
Helix 3
AA3
B
287 303Right-handed alpha
Helix 4
AA4
B
319 324Right-handed alpha
Helix 5
AA5
C
287 303Right-handed alpha
Helix 6
AA6
C
319 324Right-handed alpha
Helix 7
AA7
D
287 302Right-handed alpha
Helix 8
AA8
D
319 325Right-handed 310
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There are 4 sheets in PDB entry 6FNZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 280first strand
Strand 2
A
261 267anti-parallel
Strand 3
C
329 333parallel
Strand 4
C
308 311anti-parallel
Strand 5
C
316 317anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 317first strand
Strand 2
A
308 310anti-parallel
Strand 3
A
329 333anti-parallel
Strand 4
C
261 267parallel
Strand 5
C
276 280anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 280first strand
Strand 2
B
261 267anti-parallel
Strand 3
D
329 333parallel
Strand 4
D
308 311anti-parallel
Strand 5
D
316 317anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 317first strand
Strand 2
B
308 310anti-parallel
Strand 3
B
329 333anti-parallel
Strand 4
D
261 267parallel
Strand 5
D
276 280anti-parallel
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