Analysis of interatomic Contacts of Structural Units in PDB entry:
6FO1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FO1 entry

There are 7 chains in PDB entry 6FO1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 5	LYS 456
B	GLU 5	ASP 452
C	GLU 5	ASP 452
D	GLY 23	ASN 453
E	GLY 23	ASN 453
F	ILE 22	ASN 453
G	VAL 541	GLY 665

There are 99 helices in PDB entry 6FO1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	19	Right-handed 310
Helix 2	AA2	A	42	58	Right-handed alpha
Helix 3	AA3	A	75	87	Right-handed alpha
Helix 4	AA4	A	99	101	Right-handed 310
Helix 5	AA5	A	107	118	Right-handed alpha
Helix 6	AA6	A	240	247	Right-handed alpha
Helix 7	AA7	A	272	289	Right-handed alpha
Helix 8	AA8	A	304	307	Right-handed 310
Helix 9	AA9	A	308	320	Right-handed alpha
Helix 10	AB1	A	351	356	Right-handed alpha
Helix 11	AB2	A	367	382	Right-handed alpha
Helix 12	AB3	A	387	401	Right-handed alpha
Helix 13	AB4	A	402	409	Right-handed alpha
Helix 14	AB5	A	409	420	Right-handed alpha
Helix 15	AB6	A	426	436	Right-handed alpha
Helix 16	AB7	A	439	455	Right-handed alpha
Helix 17	AB8	B	11	16	Right-handed alpha
Helix 18	AB9	B	17	19	Right-handed 310
Helix 19	AC1	B	42	58	Right-handed alpha
Helix 20	AC2	B	75	87	Right-handed alpha
Helix 21	AC3	B	99	101	Right-handed 310
Helix 22	AC4	B	107	119	Right-handed alpha
Helix 23	AC5	B	241	249	Right-handed alpha
Helix 24	AC6	B	272	290	Right-handed alpha
Helix 25	AC7	B	304	307	Right-handed 310
Helix 26	AC8	B	308	319	Right-handed alpha
Helix 27	AC9	B	351	356	Right-handed alpha
Helix 28	AD1	B	367	382	Right-handed alpha
Helix 29	AD2	B	387	401	Right-handed alpha
Helix 30	AD3	B	402	409	Right-handed alpha
Helix 31	AD4	B	409	420	Right-handed alpha
Helix 32	AD5	B	426	437	Right-handed alpha
Helix 33	AD6	B	439	452	Right-handed alpha
Helix 34	AD7	C	14	19	Right-handed 310
Helix 35	AD8	C	42	58	Right-handed alpha
Helix 36	AD9	C	75	88	Right-handed alpha
Helix 37	AE1	C	99	101	Right-handed 310
Helix 38	AE2	C	107	119	Right-handed alpha
Helix 39	AE3	C	240	246	Right-handed alpha
Helix 40	AE4	C	272	289	Right-handed alpha
Helix 41	AE5	C	304	307	Right-handed 310
Helix 42	AE6	C	308	319	Right-handed alpha
Helix 43	AE7	C	351	356	Right-handed alpha
Helix 44	AE8	C	367	383	Right-handed alpha
Helix 45	AE9	C	387	401	Right-handed alpha
Helix 46	AF1	C	402	409	Right-handed alpha
Helix 47	AF2	C	409	420	Right-handed alpha
Helix 48	AF3	C	426	436	Right-handed alpha
Helix 49	AF4	C	439	451	Right-handed alpha
Helix 50	AF5	D	49	65	Right-handed alpha
Helix 51	AF6	D	82	95	Right-handed alpha
Helix 52	AF7	D	106	109	Right-handed 310
Helix 53	AF8	D	114	126	Right-handed alpha
Helix 54	AF9	D	244	253	Right-handed alpha
Helix 55	AG1	D	269	287	Right-handed alpha
Helix 56	AG2	D	300	304	Right-handed 310
Helix 57	AG3	D	305	316	Right-handed alpha
Helix 58	AG4	D	347	352	Right-handed alpha
Helix 59	AG5	D	363	378	Right-handed alpha
Helix 60	AG6	D	383	397	Right-handed alpha
Helix 61	AG7	D	398	414	Right-handed alpha
Helix 62	AG8	D	422	433	Right-handed alpha
Helix 63	AG9	D	435	452	Right-handed alpha
Helix 64	AH1	E	49	65	Right-handed alpha
Helix 65	AH2	E	82	95	Right-handed alpha
Helix 66	AH3	E	114	126	Right-handed alpha
Helix 67	AH4	E	244	248	Right-handed alpha
Helix 68	AH5	E	269	286	Right-handed alpha
Helix 69	AH6	E	300	304	Right-handed 310
Helix 70	AH7	E	305	314	Right-handed alpha
Helix 71	AH8	E	347	352	Right-handed alpha
Helix 72	AH9	E	363	378	Right-handed alpha
Helix 73	AI1	E	383	397	Right-handed alpha
Helix 74	AI2	E	398	414	Right-handed alpha
Helix 75	AI3	E	415	417	Right-handed 310
Helix 76	AI4	E	422	433	Right-handed alpha
Helix 77	AI5	E	435	453	Right-handed alpha
Helix 78	AI6	F	49	65	Right-handed alpha
Helix 79	AI7	F	82	95	Right-handed alpha
Helix 80	AI8	F	114	126	Right-handed alpha
Helix 81	AI9	F	244	253	Right-handed alpha
Helix 82	AJ1	F	269	287	Right-handed alpha
Helix 83	AJ2	F	300	304	Right-handed 310
Helix 84	AJ3	F	305	317	Right-handed alpha
Helix 85	AJ4	F	347	352	Right-handed alpha
Helix 86	AJ5	F	363	378	Right-handed alpha
Helix 87	AJ6	F	383	397	Right-handed alpha
Helix 88	AJ7	F	398	416	Right-handed alpha
Helix 89	AJ8	F	422	432	Right-handed alpha
Helix 90	AJ9	F	435	451	Right-handed alpha
Helix 91	AK1	G	549	560	Right-handed alpha
Helix 92	AK2	G	561	565	Right-handed 310
Helix 93	AK3	G	566	573	Right-handed alpha
Helix 94	AK4	G	576	583	Right-handed alpha
Helix 95	AK5	G	587	603	Right-handed alpha
Helix 96	AK6	G	607	620	Right-handed alpha
Helix 97	AK7	G	623	631	Right-handed alpha
Helix 98	AK8	G	634	649	Right-handed alpha
Helix 99	AK9	G	653	662	Right-handed alpha

There are 25 sheets in PDB entry 6FO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	39	40	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	97	first strand
Strand 2	A	298	302	parallel
Strand 3	A	326	331	parallel
Strand 4	A	65	69	parallel
Strand 5	A	358	362	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	120	123	anti-parallel
Strand 3	A	293	296	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	335	337	first strand
Strand 2	A	345	347	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	385	386	first strand
Strand 2	A	424	425	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	438	first strand
Strand 2	F	354	359	anti-parallel
Strand 3	F	72	77	parallel
Strand 4	F	323	328	parallel
Strand 5	F	295	299	parallel
Strand 6	F	100	104	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	B	39	40	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	97	first strand
Strand 2	B	298	302	parallel
Strand 3	B	326	331	parallel
Strand 4	B	65	69	parallel
Strand 5	B	358	362	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	123	first strand
Strand 2	B	293	296	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	335	337	first strand
Strand 2	B	345	347	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	C	39	40	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	69	first strand
Strand 2	C	358	362	parallel
Strand 3	F	433	434	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	97	first strand
Strand 2	C	298	302	parallel
Strand 3	C	326	330	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	239	first strand
Strand 2	C	120	124	anti-parallel
Strand 3	C	294	296	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	335	337	first strand
Strand 2	C	345	347	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	437	438	first strand
Strand 2	E	354	358	anti-parallel
Strand 3	E	72	76	parallel
Strand 4	E	323	328	parallel
Strand 5	E	295	299	parallel
Strand 6	E	100	104	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	46	47	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	104	first strand
Strand 2	D	295	299	parallel
Strand 3	D	323	328	parallel
Strand 4	D	72	77	parallel
Strand 5	D	354	359	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	243	first strand
Strand 2	D	127	130	anti-parallel
Strand 3	D	290	293	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	332	334	first strand
Strand 2	D	341	343	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	243	first strand
Strand 2	E	127	130	anti-parallel
Strand 3	E	290	293	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	332	334	first strand
Strand 2	E	341	343	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	43	first strand
Strand 2	F	46	47	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	242	243	first strand
Strand 2	F	127	129	anti-parallel
Strand 3	F	291	293	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	332	334	first strand
Strand 2	F	341	343	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FO1

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FO1