Analysis of interatomic Contacts of Structural Units in PDB entry:
6FO6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FO6 entry

There are 18 chains in PDB entry 6FO6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	SER 1	GLY 196
A	ALA 2	ARG 445
B	GLN 22	LEU 439
C	LEU 10	TRP 379
D	GLU 4	PRO 240
F	TRP 12	LYS 109
G	ARG 2	ASN 73
H	LEU 13	LEU 77
J	PRO 3	GLU 60
R	SER 1	GLY 196
N	ALA 2	ARG 445
O	GLN 22	LEU 439
P	LEU 10	TRP 379
Q	GLU 4	PRO 240
S	TRP 12	LYS 109
T	ARG 2	ASN 73
U	LEU 13	LEU 77
W	PRO 3	TYR 59

There are171 helices in PDB entry 6FO6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	15	19	Right-handed 310
Helix 2	AA2	E	25	63	Right-handed alpha
Helix 3	AA3	E	65	74	Right-handed alpha
Helix 4	AA4	E	106	112	Right-handed alpha
Helix 5	AA5	A	3	10	Right-handed alpha
Helix 6	AA6	A	44	48	Right-handed 310
Helix 7	AA7	A	54	63	Right-handed alpha
Helix 8	AA8	A	73	83	Right-handed alpha
Helix 9	AA9	A	105	119	Right-handed alpha
Helix 10	AB1	A	123	142	Right-handed alpha
Helix 11	AB2	A	144	158	Right-handed alpha
Helix 12	AB3	A	161	165	Right-handed 310
Helix 13	AB4	A	170	176	Right-handed alpha
Helix 14	AB5	A	178	190	Right-handed alpha
Helix 15	AB6	A	191	193	Right-handed 310
Helix 16	AB7	A	204	217	Right-handed alpha
Helix 17	AB8	A	266	278	Right-handed alpha
Helix 18	AB9	A	286	290	Right-handed 310
Helix 19	AC1	A	292	302	Right-handed alpha
Helix 20	AC2	A	330	348	Right-handed alpha
Helix 21	AC3	A	350	369	Right-handed alpha
Helix 22	AC4	A	371	386	Right-handed alpha
Helix 23	AC5	A	391	401	Right-handed alpha
Helix 24	AC6	A	403	415	Right-handed alpha
Helix 25	AC7	A	433	440	Right-handed alpha
Helix 26	AC8	B	64	73	Right-handed alpha
Helix 27	AC9	B	81	92	Right-handed alpha
Helix 28	AD1	B	115	128	Right-handed alpha
Helix 29	AD2	B	133	152	Right-handed alpha
Helix 30	AD3	B	155	168	Right-handed alpha
Helix 31	AD4	B	179	183	Right-handed 310
Helix 32	AD5	B	187	199	Right-handed alpha
Helix 33	AD6	B	212	223	Right-handed alpha
Helix 34	AD7	B	266	280	Right-handed alpha
Helix 35	AD8	B	293	303	Right-handed alpha
Helix 36	AD9	B	332	350	Right-handed alpha
Helix 37	AE1	B	353	372	Right-handed alpha
Helix 38	AE2	B	374	389	Right-handed alpha
Helix 39	AE3	B	394	404	Right-handed alpha
Helix 40	AE4	B	406	420	Right-handed alpha
Helix 41	AE5	C	13	18	Right-handed 310
Helix 42	AE6	C	28	30	Right-handed 310
Helix 43	AE7	C	31	53	Right-handed alpha
Helix 44	AE8	C	61	73	Right-handed alpha
Helix 45	AE9	C	75	104	Right-handed alpha
Helix 46	AF1	C	105	108	Right-handed 310
Helix 47	AF2	C	109	125	Right-handed alpha
Helix 48	AF3	C	125	133	Right-handed alpha
Helix 49	AF4	C	136	149	Right-handed alpha
Helix 50	AF5	C	150	153	Right-handed 310
Helix 51	AF6	C	156	166	Right-handed alpha
Helix 52	AF7	C	171	183	Right-handed alpha
Helix 53	AF8	C	184	201	Right-handed alpha
Helix 54	AF9	C	223	246	Right-handed alpha
Helix 55	AG1	C	252	257	Right-handed 310
Helix 56	AG2	C	274	284	Right-handed alpha
Helix 57	AG3	C	286	300	Right-handed alpha
Helix 58	AG4	C	301	308	Right-handed 310
Helix 59	AG5	C	318	341	Right-handed alpha
Helix 60	AG6	C	344	364	Right-handed alpha
Helix 61	AG7	C	364	377	Right-handed alpha
Helix 62	AG8	D	22	36	Right-handed alpha
Helix 63	AG9	D	57	66	Right-handed alpha
Helix 64	AH1	D	97	105	Right-handed alpha
Helix 65	AH2	D	116	120	Right-handed 310
Helix 66	AH3	D	123	132	Right-handed alpha
Helix 67	AH4	D	178	195	Right-handed alpha
Helix 68	AH5	D	197	227	Right-handed alpha
Helix 69	AH6	D	227	232	Right-handed alpha
Helix 70	AH7	F	13	25	Right-handed alpha
Helix 71	AH8	F	33	37	Right-handed 310
Helix 72	AH9	F	40	49	Right-handed alpha
Helix 73	AI1	F	51	72	Right-handed alpha
Helix 74	AI2	F	76	80	Right-handed 310
Helix 75	AI3	F	90	109	Right-handed alpha
Helix 76	AI4	G	20	23	Right-handed 310
Helix 77	AI5	G	32	43	Right-handed alpha
Helix 78	AI6	G	44	70	Right-handed alpha
Helix 79	AI7	H	15	25	Right-handed alpha
Helix 80	AI8	H	27	47	Right-handed alpha
Helix 81	AI9	H	54	71	Right-handed alpha
Helix 82	AJ1	H	72	76	Right-handed 310
Helix 83	AJ2	J	4	13	Right-handed alpha
Helix 84	AJ3	J	16	47	Right-handed alpha
Helix 85	AJ4	J	51	57	Right-handed alpha
Helix 86	AJ5	J	58	60	Right-handed 310
Helix 87	AJ6	R	15	19	Right-handed 310
Helix 88	AJ7	R	25	63	Right-handed alpha
Helix 89	AJ8	R	65	74	Right-handed alpha
Helix 90	AJ9	R	106	112	Right-handed alpha
Helix 91	AK1	N	3	10	Right-handed alpha
Helix 92	AK2	N	44	48	Right-handed 310
Helix 93	AK3	N	54	63	Right-handed alpha
Helix 94	AK4	N	73	83	Right-handed alpha
Helix 95	AK5	N	105	119	Right-handed alpha
Helix 96	AK6	N	123	142	Right-handed alpha
Helix 97	AK7	N	144	158	Right-handed alpha
Helix 98	AK8	N	161	165	Right-handed 310
Helix 99	AK9	N	170	176	Right-handed alpha
Helix 100	AL1	N	178	190	Right-handed alpha
Helix 101	AL2	N	191	193	Right-handed 310
Helix 102	AL3	N	204	217	Right-handed alpha
Helix 103	AL4	N	266	278	Right-handed alpha
Helix 104	AL5	N	286	290	Right-handed 310
Helix 105	AL6	N	292	302	Right-handed alpha
Helix 106	AL7	N	330	348	Right-handed alpha
Helix 107	AL8	N	350	369	Right-handed alpha
Helix 108	AL9	N	371	386	Right-handed alpha
Helix 109	AM1	N	391	401	Right-handed alpha
Helix 110	AM2	N	403	415	Right-handed alpha
Helix 111	AM3	N	433	440	Right-handed alpha
Helix 112	AM4	O	64	73	Right-handed alpha
Helix 113	AM5	O	81	92	Right-handed alpha
Helix 114	AM6	O	115	128	Right-handed alpha
Helix 115	AM7	O	133	152	Right-handed alpha
Helix 116	AM8	O	155	168	Right-handed alpha
Helix 117	AM9	O	179	183	Right-handed 310
Helix 118	AN1	O	187	199	Right-handed alpha
Helix 119	AN2	O	212	223	Right-handed alpha
Helix 120	AN3	O	266	280	Right-handed alpha
Helix 121	AN4	O	293	303	Right-handed alpha
Helix 122	AN5	O	332	350	Right-handed alpha
Helix 123	AN6	O	353	372	Right-handed alpha
Helix 124	AN7	O	374	389	Right-handed alpha
Helix 125	AN8	O	394	404	Right-handed alpha
Helix 126	AN9	O	406	420	Right-handed alpha
Helix 127	AO1	P	13	18	Right-handed 310
Helix 128	AO2	P	28	30	Right-handed 310
Helix 129	AO3	P	31	53	Right-handed alpha
Helix 130	AO4	P	61	73	Right-handed alpha
Helix 131	AO5	P	75	104	Right-handed alpha
Helix 132	AO6	P	105	108	Right-handed 310
Helix 133	AO7	P	109	125	Right-handed alpha
Helix 134	AO8	P	125	133	Right-handed alpha
Helix 135	AO9	P	136	149	Right-handed alpha
Helix 136	AP1	P	150	153	Right-handed 310
Helix 137	AP2	P	156	166	Right-handed alpha
Helix 138	AP3	P	171	183	Right-handed alpha
Helix 139	AP4	P	184	201	Right-handed alpha
Helix 140	AP5	P	223	246	Right-handed alpha
Helix 141	AP6	P	252	257	Right-handed 310
Helix 142	AP7	P	274	284	Right-handed alpha
Helix 143	AP8	P	286	300	Right-handed alpha
Helix 144	AP9	P	301	308	Right-handed 310
Helix 145	AQ1	P	318	341	Right-handed alpha
Helix 146	AQ2	P	344	364	Right-handed alpha
Helix 147	AQ3	P	364	377	Right-handed alpha
Helix 148	AQ4	Q	22	36	Right-handed alpha
Helix 149	AQ5	Q	57	66	Right-handed alpha
Helix 150	AQ6	Q	97	105	Right-handed alpha
Helix 151	AQ7	Q	116	120	Right-handed 310
Helix 152	AQ8	Q	123	132	Right-handed alpha
Helix 153	AQ9	Q	178	195	Right-handed alpha
Helix 154	AR1	Q	197	227	Right-handed alpha
Helix 155	AR2	Q	227	232	Right-handed alpha
Helix 156	AR3	S	13	25	Right-handed alpha
Helix 157	AR4	S	33	37	Right-handed 310
Helix 158	AR5	S	40	49	Right-handed alpha
Helix 159	AR6	S	51	72	Right-handed alpha
Helix 160	AR7	S	76	80	Right-handed 310
Helix 161	AR8	S	90	109	Right-handed alpha
Helix 162	AR9	T	20	23	Right-handed 310
Helix 163	AS1	T	32	43	Right-handed alpha
Helix 164	AS2	T	44	70	Right-handed alpha
Helix 165	AS3	U	15	25	Right-handed alpha
Helix 166	AS4	U	27	47	Right-handed alpha
Helix 167	AS5	U	54	71	Right-handed alpha
Helix 168	AS6	U	72	76	Right-handed 310
Helix 169	AS7	W	4	13	Right-handed alpha
Helix 170	AS8	W	16	47	Right-handed alpha
Helix 171	AS9	W	51	57	Right-handed alpha

There are 20 sheets in PDB entry 6FO6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	77	first strand
Strand 2	E	193	195	anti-parallel
Strand 3	E	185	187	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	91	first strand
Strand 2	E	94	98	anti-parallel
Strand 3	E	135	136	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	148	first strand
Strand 2	E	156	157	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	18	first strand
Strand 2	A	24	27	anti-parallel
Strand 3	A	195	201	parallel
Strand 4	A	34	41	anti-parallel
Strand 5	A	95	102	anti-parallel
Strand 6	A	85	90	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	281	first strand
Strand 2	A	306	307	anti-parallel
Strand 3	A	318	326	anti-parallel
Strand 4	A	310	313	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	281	first strand
Strand 2	A	306	307	anti-parallel
Strand 3	A	318	326	anti-parallel
Strand 4	A	251	259	anti-parallel
Strand 5	A	421	426	anti-parallel
Strand 6	A	239	245	parallel
Strand 7	G	11	18	anti-parallel
Strand 8	D	234	236	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	34	37	anti-parallel
Strand 3	B	204	209	parallel
Strand 4	B	44	51	anti-parallel
Strand 5	B	105	112	anti-parallel
Strand 6	B	95	100	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	247	first strand
Strand 2	B	422	428	parallel
Strand 3	B	252	260	anti-parallel
Strand 4	B	320	329	anti-parallel
Strand 5	B	308	315	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	74	first strand
Strand 2	D	80	84	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	149	first strand
Strand 2	D	157	158	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	76	77	first strand
Strand 2	R	193	195	anti-parallel
Strand 3	R	185	187	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	87	91	first strand
Strand 2	R	94	98	anti-parallel
Strand 3	R	135	136	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	147	148	first strand
Strand 2	R	156	157	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	15	18	first strand
Strand 2	N	24	27	anti-parallel
Strand 3	N	195	201	parallel
Strand 4	N	34	41	anti-parallel
Strand 5	N	95	102	anti-parallel
Strand 6	N	85	90	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	280	281	first strand
Strand 2	N	306	307	anti-parallel
Strand 3	N	318	326	anti-parallel
Strand 4	N	310	313	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	280	281	first strand
Strand 2	N	306	307	anti-parallel
Strand 3	N	318	326	anti-parallel
Strand 4	N	251	259	anti-parallel
Strand 5	N	421	426	anti-parallel
Strand 6	N	239	245	parallel
Strand 7	T	11	18	anti-parallel
Strand 8	Q	234	236	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	25	28	first strand
Strand 2	O	34	37	anti-parallel
Strand 3	O	204	209	parallel
Strand 4	O	44	51	anti-parallel
Strand 5	O	105	112	anti-parallel
Strand 6	O	95	100	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	242	247	first strand
Strand 2	O	422	428	parallel
Strand 3	O	252	260	anti-parallel
Strand 4	O	320	329	anti-parallel
Strand 5	O	308	315	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	69	74	first strand
Strand 2	Q	80	84	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	148	149	first strand
Strand 2	Q	157	158	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FO6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FO6