Analysis of interatomic Contacts of Structural Units in PDB entry:
6FOF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FOF entry

There are 12 chains in PDB entry 6FOF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	PRO 113	ILE 250
D	TYR 101	ILE 250
E	PRO 113	ILE 250
G	PRO 113	ILE 250
A	ASP 3	ILE 250
B	PRO 113	ILE 250
F	ASN 4	ILE 250
H	PRO 113	ILE 250
I	PRO 113	ILE 250
J	PRO 113	ILE 250
K	PRO 113	ILE 250
L	PRO 113	ILE 250

There are 12 helices in PDB entry 6FOF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	227	231	Right-handed 310
Helix 2	AA2	D	227	231	Right-handed 310
Helix 3	AA3	E	227	231	Right-handed 310
Helix 4	AA4	G	227	231	Right-handed 310
Helix 5	AA5	A	227	231	Right-handed 310
Helix 6	AA6	B	227	231	Right-handed 310
Helix 7	AA7	F	227	231	Right-handed 310
Helix 8	AA8	H	227	231	Right-handed 310
Helix 9	AA9	I	227	231	Right-handed 310
Helix 10	AB1	J	227	231	Right-handed 310
Helix 11	AB2	K	227	231	Right-handed 310
Helix 12	AB3	L	227	231	Right-handed 310

There are 36 sheets in PDB entry 6FOF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	121	first strand
Strand 2	C	233	238	anti-parallel
Strand 3	C	145	151	anti-parallel
Strand 4	C	154	165	anti-parallel
Strand 5	C	168	177	anti-parallel
Strand 6	C	180	181	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	121	first strand
Strand 2	C	233	238	anti-parallel
Strand 3	C	145	151	anti-parallel
Strand 4	C	154	165	anti-parallel
Strand 5	C	168	177	anti-parallel
Strand 6	C	185	187	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	222	first strand
Strand 2	C	208	213	anti-parallel
Strand 3	C	197	204	anti-parallel
Strand 4	C	131	138	anti-parallel
Strand 5	C	240	248	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	121	first strand
Strand 2	D	233	238	anti-parallel
Strand 3	D	145	151	anti-parallel
Strand 4	D	154	165	anti-parallel
Strand 5	D	168	177	anti-parallel
Strand 6	D	180	181	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	121	first strand
Strand 2	D	233	238	anti-parallel
Strand 3	D	145	151	anti-parallel
Strand 4	D	154	165	anti-parallel
Strand 5	D	168	177	anti-parallel
Strand 6	D	185	187	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	222	first strand
Strand 2	D	208	213	anti-parallel
Strand 3	D	197	204	anti-parallel
Strand 4	D	130	138	anti-parallel
Strand 5	D	240	249	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	121	first strand
Strand 2	E	233	238	anti-parallel
Strand 3	E	145	151	anti-parallel
Strand 4	E	154	165	anti-parallel
Strand 5	E	168	177	anti-parallel
Strand 6	E	180	181	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	121	first strand
Strand 2	E	233	238	anti-parallel
Strand 3	E	145	151	anti-parallel
Strand 4	E	154	165	anti-parallel
Strand 5	E	168	177	anti-parallel
Strand 6	E	185	187	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	222	first strand
Strand 2	E	208	213	anti-parallel
Strand 3	E	197	204	anti-parallel
Strand 4	E	130	138	anti-parallel
Strand 5	E	240	249	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	121	first strand
Strand 2	G	233	238	anti-parallel
Strand 3	G	145	151	anti-parallel
Strand 4	G	154	165	anti-parallel
Strand 5	G	168	177	anti-parallel
Strand 6	G	180	181	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	121	first strand
Strand 2	G	233	238	anti-parallel
Strand 3	G	145	151	anti-parallel
Strand 4	G	154	165	anti-parallel
Strand 5	G	168	177	anti-parallel
Strand 6	G	185	187	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	216	222	first strand
Strand 2	G	208	213	anti-parallel
Strand 3	G	197	204	anti-parallel
Strand 4	G	130	138	anti-parallel
Strand 5	G	240	249	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	8	first strand
Strand 2	A	13	15	anti-parallel
Strand 3	A	240	249	anti-parallel
Strand 4	A	130	138	anti-parallel
Strand 5	A	197	204	anti-parallel
Strand 6	A	208	213	anti-parallel
Strand 7	A	216	222	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	121	first strand
Strand 2	A	233	238	anti-parallel
Strand 3	A	145	151	anti-parallel
Strand 4	A	154	165	anti-parallel
Strand 5	A	168	177	anti-parallel
Strand 6	A	180	181	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	121	first strand
Strand 2	A	233	238	anti-parallel
Strand 3	A	145	151	anti-parallel
Strand 4	A	154	165	anti-parallel
Strand 5	A	168	177	anti-parallel
Strand 6	A	185	187	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	121	first strand
Strand 2	B	233	238	anti-parallel
Strand 3	B	145	151	anti-parallel
Strand 4	B	154	162	anti-parallel
Strand 5	B	170	177	anti-parallel
Strand 6	B	180	181	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	121	first strand
Strand 2	B	233	238	anti-parallel
Strand 3	B	145	151	anti-parallel
Strand 4	B	154	162	anti-parallel
Strand 5	B	170	177	anti-parallel
Strand 6	B	185	187	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	222	first strand
Strand 2	B	208	213	anti-parallel
Strand 3	B	197	204	anti-parallel
Strand 4	B	130	138	anti-parallel
Strand 5	B	240	249	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	8	first strand
Strand 2	F	12	15	anti-parallel
Strand 3	F	240	249	anti-parallel
Strand 4	F	130	138	anti-parallel
Strand 5	F	197	204	anti-parallel
Strand 6	F	208	213	anti-parallel
Strand 7	F	216	222	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	121	first strand
Strand 2	F	233	238	anti-parallel
Strand 3	F	145	151	anti-parallel
Strand 4	F	154	165	anti-parallel
Strand 5	F	168	177	anti-parallel
Strand 6	F	180	181	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	121	first strand
Strand 2	F	233	238	anti-parallel
Strand 3	F	145	151	anti-parallel
Strand 4	F	154	165	anti-parallel
Strand 5	F	168	177	anti-parallel
Strand 6	F	185	187	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	121	first strand
Strand 2	H	233	238	anti-parallel
Strand 3	H	145	151	anti-parallel
Strand 4	H	154	165	anti-parallel
Strand 5	H	168	177	anti-parallel
Strand 6	H	180	181	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	121	first strand
Strand 2	H	233	238	anti-parallel
Strand 3	H	145	151	anti-parallel
Strand 4	H	154	165	anti-parallel
Strand 5	H	168	177	anti-parallel
Strand 6	H	185	187	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	216	222	first strand
Strand 2	H	208	213	anti-parallel
Strand 3	H	197	204	anti-parallel
Strand 4	H	130	138	anti-parallel
Strand 5	H	240	249	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	118	121	first strand
Strand 2	I	233	238	anti-parallel
Strand 3	I	145	151	anti-parallel
Strand 4	I	154	162	anti-parallel
Strand 5	I	170	177	anti-parallel
Strand 6	I	180	181	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	118	121	first strand
Strand 2	I	233	238	anti-parallel
Strand 3	I	145	151	anti-parallel
Strand 4	I	154	162	anti-parallel
Strand 5	I	170	177	anti-parallel
Strand 6	I	185	187	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	216	222	first strand
Strand 2	I	208	213	anti-parallel
Strand 3	I	197	204	anti-parallel
Strand 4	I	130	138	anti-parallel
Strand 5	I	240	249	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	118	121	first strand
Strand 2	J	233	238	anti-parallel
Strand 3	J	145	151	anti-parallel
Strand 4	J	154	165	anti-parallel
Strand 5	J	168	177	anti-parallel
Strand 6	J	180	181	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	118	121	first strand
Strand 2	J	233	238	anti-parallel
Strand 3	J	145	151	anti-parallel
Strand 4	J	154	165	anti-parallel
Strand 5	J	168	177	anti-parallel
Strand 6	J	185	187	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	216	222	first strand
Strand 2	J	208	213	anti-parallel
Strand 3	J	197	204	anti-parallel
Strand 4	J	130	138	anti-parallel
Strand 5	J	240	249	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	121	first strand
Strand 2	K	233	238	anti-parallel
Strand 3	K	145	151	anti-parallel
Strand 4	K	154	165	anti-parallel
Strand 5	K	168	177	anti-parallel
Strand 6	K	180	181	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	121	first strand
Strand 2	K	233	238	anti-parallel
Strand 3	K	145	151	anti-parallel
Strand 4	K	154	165	anti-parallel
Strand 5	K	168	177	anti-parallel
Strand 6	K	185	187	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	216	222	first strand
Strand 2	K	208	213	anti-parallel
Strand 3	K	197	204	anti-parallel
Strand 4	K	130	138	anti-parallel
Strand 5	K	240	249	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	121	first strand
Strand 2	L	233	238	anti-parallel
Strand 3	L	145	151	anti-parallel
Strand 4	L	154	165	anti-parallel
Strand 5	L	168	177	anti-parallel
Strand 6	L	180	181	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	121	first strand
Strand 2	L	233	238	anti-parallel
Strand 3	L	145	151	anti-parallel
Strand 4	L	154	165	anti-parallel
Strand 5	L	168	177	anti-parallel
Strand 6	L	185	187	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	216	222	first strand
Strand 2	L	208	213	anti-parallel
Strand 3	L	197	204	anti-parallel
Strand 4	L	131	138	anti-parallel
Strand 5	L	240	246	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FOF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FOF