Analysis of interatomic Contacts of Structural Units in PDB entry:
6FOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FOP entry

There is 1 chain in PDB entry 6FOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 24SER 740
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6FOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 70Right-handed alpha
Helix 2
AA2
A
233 244Right-handed alpha
Helix 3
AA3
A
287 292Right-handed alpha
Helix 4
AA4
A
339 353Right-handed alpha
Helix 5
AA5
A
361 383Right-handed alpha
Helix 6
AA6
A
384 403Right-handed alpha
Helix 7
AA7
A
438 457Right-handed alpha
Helix 8
AA8
A
457 462Right-handed alpha
Helix 9
AA9
A
466 479Right-handed alpha
Helix 10
AB1
A
516 535Right-handed alpha
Helix 11
AB2
A
536 558Right-handed alpha
Helix 12
AB3
A
592 599Right-handed alpha
Helix 13
AB4
A
607 613Right-handed 310
Helix 14
AB5
A
614 630Right-handed alpha
Helix 15
AB6
A
637 646Right-handed alpha
Helix 16
AB7
A
649 657Right-handed alpha
Helix 17
AB8
A
668 683Right-handed alpha
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There are 10 sheets in PDB entry 6FOP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
31 34anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
82 86anti-parallel
Strand 3
A
89 93anti-parallel
Strand 4
A
112 116anti-parallel
Strand 5
A
166 170anti-parallel
Strand 6
A
212 216anti-parallel
Strand 7
A
204 206anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
582 584anti-parallel
Strand 3
A
577 579anti-parallel
Strand 4
A
513 514anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
134 141anti-parallel
Strand 3
A
144 151anti-parallel
Strand 4
A
156 162anti-parallel
Strand 5
A
223 229anti-parallel
Strand 6
A
193 198anti-parallel
Strand 7
A
185 190anti-parallel
Strand 8
A
175 178anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 258first strand
Strand 2
A
263 274anti-parallel
Strand 3
A
318 324anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
303 306anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 417first strand
Strand 2
A
422 426anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 494first strand
Strand 2
A
499 500anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
684 685first strand
Strand 2
A
696 701anti-parallel
Strand 3
A
704 711anti-parallel
Strand 4
A
733 738anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 720first strand
Strand 2
A
726 729anti-parallel
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