Analysis of interatomic Contacts of Structural Units in PDB entry:
6FPF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FPF entry

There are 4 chains in PDB entry 6FPF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 29THR 285
C
 GLY 31THR 285
D
 GLU 29THR 285
E
 ALA 30THR 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 6FPF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 43Right-handed alpha
Helix 2
AA2
A
44 59Right-handed alpha
Helix 3
AA3
A
64 75Right-handed alpha
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
92 97Right-handed 310
Helix 6
AA6
A
141 153Right-handed alpha
Helix 7
AA7
A
160 181Right-handed alpha
Helix 8
AA8
A
181 191Right-handed alpha
Helix 9
AA9
A
193 202Right-handed alpha
Helix 10
AB1
A
207 220Right-handed alpha
Helix 11
AB2
A
221 239Right-handed alpha
Helix 12
AB3
A
252 264Right-handed alpha
Helix 13
AB4
A
264 279Right-handed alpha
Helix 14
AB5
A
280 285Right-handed 310
Helix 15
AB6
C
32 43Right-handed alpha
Helix 16
AB7
C
44 59Right-handed alpha
Helix 17
AB8
C
64 76Right-handed alpha
Helix 18
AB9
C
81 90Right-handed alpha
Helix 19
AC1
C
92 97Right-handed 310
Helix 20
AC2
C
141 152Right-handed alpha
Helix 21
AC3
C
160 181Right-handed alpha
Helix 22
AC4
C
181 193Right-handed alpha
Helix 23
AC5
C
193 202Right-handed alpha
Helix 24
AC6
C
207 220Right-handed alpha
Helix 25
AC7
C
221 240Right-handed alpha
Helix 26
AC8
C
252 264Right-handed alpha
Helix 27
AC9
C
264 280Right-handed alpha
Helix 28
AD1
C
281 285Right-handed 310
Helix 29
AD2
D
30 43Right-handed alpha
Helix 30
AD3
D
44 59Right-handed alpha
Helix 31
AD4
D
64 76Right-handed alpha
Helix 32
AD5
D
81 89Right-handed alpha
Helix 33
AD6
D
92 97Right-handed 310
Helix 34
AD7
D
141 153Right-handed alpha
Helix 35
AD8
D
160 181Right-handed alpha
Helix 36
AD9
D
181 193Right-handed alpha
Helix 37
AE1
D
193 202Right-handed alpha
Helix 38
AE2
D
207 220Right-handed alpha
Helix 39
AE3
D
221 241Right-handed alpha
Helix 40
AE4
D
252 264Right-handed alpha
Helix 41
AE5
D
264 280Right-handed alpha
Helix 42
AE6
D
281 285Right-handed 310
Helix 43
AE7
E
31 44Right-handed alpha
Helix 44
AE8
E
44 59Right-handed alpha
Helix 45
AE9
E
64 76Right-handed alpha
Helix 46
AF1
E
81 90Right-handed alpha
Helix 47
AF2
E
90 95Right-handed alpha
Helix 48
AF3
E
141 152Right-handed alpha
Helix 49
AF4
E
160 181Right-handed alpha
Helix 50
AF5
E
181 191Right-handed alpha
Helix 51
AF6
E
193 202Right-handed alpha
Helix 52
AF7
E
207 220Right-handed alpha
Helix 53
AF8
E
221 241Right-handed alpha
Helix 54
AF9
E
252 264Right-handed alpha
Helix 55
AG1
E
264 280Right-handed alpha
Helix 56
AG2
E
281 285Right-handed 310
Back to top of page
There are no sheets in PDB entry 6FPF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il