Analysis of interatomic Contacts of Structural Units in PDB entry:
6FQB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FQB entry

There are 8 chains in PDB entry 6FQB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 43	ARG 439
E	MET 1	ALA 247
B	SER 43	SER 438
F	MET 1	ALA 247
C	SER 43	SER 438
G	MET 1	ALA 247
D	SER 43	ILE 441
H	MET 1	ALA 247

There are 88 helices in PDB entry 6FQB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	75	Right-handed alpha
Helix 2	AA2	A	88	93	Right-handed alpha
Helix 3	AA3	A	115	120	Right-handed alpha
Helix 4	AA4	A	143	157	Right-handed alpha
Helix 5	AA5	A	268	284	Right-handed alpha
Helix 6	AA6	A	287	299	Right-handed alpha
Helix 7	AA7	A	300	303	Right-handed 310
Helix 8	AA8	A	322	334	Right-handed alpha
Helix 9	AA9	A	355	361	Right-handed 310
Helix 10	AB1	A	363	370	Right-handed 310
Helix 11	AB2	A	381	392	Right-handed alpha
Helix 12	AB3	A	395	397	Right-handed 310
Helix 13	AB4	A	404	414	Right-handed alpha
Helix 14	AB5	A	425	433	Right-handed alpha
Helix 15	AB6	E	33	46	Right-handed alpha
Helix 16	AB7	E	75	86	Right-handed alpha
Helix 17	AB8	E	89	99	Right-handed alpha
Helix 18	AB9	E	107	114	Right-handed alpha
Helix 19	AC1	E	208	213	Right-handed alpha
Helix 20	AC2	E	213	230	Right-handed alpha
Helix 21	AC3	E	237	242	Right-handed alpha
Helix 22	AC4	E	243	246	Right-handed 310
Helix 23	AC5	B	58	75	Right-handed alpha
Helix 24	AC6	B	85	90	Right-handed 310
Helix 25	AC7	B	115	123	Right-handed alpha
Helix 26	AC8	B	144	157	Right-handed alpha
Helix 27	AC9	B	268	284	Right-handed alpha
Helix 28	AD1	B	287	299	Right-handed alpha
Helix 29	AD2	B	300	303	Right-handed 310
Helix 30	AD3	B	322	334	Right-handed alpha
Helix 31	AD4	B	355	361	Right-handed 310
Helix 32	AD5	B	363	370	Right-handed 310
Helix 33	AD6	B	381	392	Right-handed alpha
Helix 34	AD7	B	395	397	Right-handed 310
Helix 35	AD8	B	404	414	Right-handed alpha
Helix 36	AD9	B	425	433	Right-handed alpha
Helix 37	AE1	F	33	46	Right-handed alpha
Helix 38	AE2	F	75	86	Right-handed alpha
Helix 39	AE3	F	89	99	Right-handed alpha
Helix 40	AE4	F	107	114	Right-handed alpha
Helix 41	AE5	F	208	213	Right-handed alpha
Helix 42	AE6	F	213	230	Right-handed alpha
Helix 43	AE7	F	237	242	Right-handed alpha
Helix 44	AE8	F	243	246	Right-handed 310
Helix 45	AE9	C	58	75	Right-handed alpha
Helix 46	AF1	C	85	90	Right-handed 310
Helix 47	AF2	C	115	123	Right-handed alpha
Helix 48	AF3	C	144	157	Right-handed alpha
Helix 49	AF4	C	268	284	Right-handed alpha
Helix 50	AF5	C	287	299	Right-handed alpha
Helix 51	AF6	C	300	303	Right-handed 310
Helix 52	AF7	C	322	334	Right-handed alpha
Helix 53	AF8	C	355	361	Right-handed 310
Helix 54	AF9	C	363	370	Right-handed 310
Helix 55	AG1	C	381	392	Right-handed alpha
Helix 56	AG2	C	395	397	Right-handed 310
Helix 57	AG3	C	404	414	Right-handed alpha
Helix 58	AG4	C	425	432	Right-handed alpha
Helix 59	AG5	G	33	46	Right-handed alpha
Helix 60	AG6	G	75	86	Right-handed alpha
Helix 61	AG7	G	89	99	Right-handed alpha
Helix 62	AG8	G	107	114	Right-handed alpha
Helix 63	AG9	G	208	213	Right-handed alpha
Helix 64	AH1	G	213	230	Right-handed alpha
Helix 65	AH2	G	237	242	Right-handed alpha
Helix 66	AH3	G	243	246	Right-handed 310
Helix 67	AH4	D	58	75	Right-handed alpha
Helix 68	AH5	D	85	90	Right-handed 310
Helix 69	AH6	D	115	123	Right-handed alpha
Helix 70	AH7	D	144	157	Right-handed alpha
Helix 71	AH8	D	268	284	Right-handed alpha
Helix 72	AH9	D	287	299	Right-handed alpha
Helix 73	AI1	D	300	303	Right-handed 310
Helix 74	AI2	D	322	334	Right-handed alpha
Helix 75	AI3	D	355	361	Right-handed 310
Helix 76	AI4	D	363	370	Right-handed 310
Helix 77	AI5	D	381	392	Right-handed alpha
Helix 78	AI6	D	395	397	Right-handed 310
Helix 79	AI7	D	404	414	Right-handed alpha
Helix 80	AI8	D	425	433	Right-handed alpha
Helix 81	AI9	H	33	46	Right-handed alpha
Helix 82	AJ1	H	75	86	Right-handed alpha
Helix 83	AJ2	H	89	99	Right-handed alpha
Helix 84	AJ3	H	107	114	Right-handed alpha
Helix 85	AJ4	H	208	213	Right-handed alpha
Helix 86	AJ5	H	213	230	Right-handed alpha
Helix 87	AJ6	H	237	242	Right-handed alpha
Helix 88	AJ7	H	243	246	Right-handed 310

There are 28 sheets in PDB entry 6FQB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	106	110	parallel
Strand 3	A	49	54	parallel
Strand 4	A	127	130	parallel
Strand 5	A	162	166	parallel
Strand 6	A	181	186	parallel
Strand 7	A	239	247	parallel
Strand 8	A	252	256	anti-parallel
Strand 9	A	259	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	213	217	first strand
Strand 2	A	223	226	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	310	first strand
Strand 2	A	313	319	anti-parallel
Strand 3	A	419	424	parallel
Strand 4	A	340	345	parallel
Strand 5	A	375	378	parallel
Strand 6	A	399	401	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	48	55	anti-parallel
Strand 3	E	15	22	parallel
Strand 4	E	68	71	parallel
Strand 5	E	102	106	parallel
Strand 6	E	200	203	parallel
Strand 7	E	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	118	first strand
Strand 2	E	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	136	first strand
Strand 2	E	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	193	first strand
Strand 2	E	178	182	anti-parallel
Strand 3	E	143	151	anti-parallel
Strand 4	E	156	164	anti-parallel
Strand 5	E	205	206	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	78	first strand
Strand 2	B	106	110	parallel
Strand 3	B	49	54	parallel
Strand 4	B	127	130	parallel
Strand 5	B	162	166	parallel
Strand 6	B	181	186	parallel
Strand 7	B	239	247	parallel
Strand 8	B	252	256	anti-parallel
Strand 9	B	259	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	217	first strand
Strand 2	B	223	226	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	310	first strand
Strand 2	B	313	319	anti-parallel
Strand 3	B	419	424	parallel
Strand 4	B	340	345	parallel
Strand 5	B	375	378	parallel
Strand 6	B	399	401	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	48	55	anti-parallel
Strand 3	F	15	22	parallel
Strand 4	F	68	71	parallel
Strand 5	F	102	106	parallel
Strand 6	F	200	203	parallel
Strand 7	F	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	118	first strand
Strand 2	F	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	134	136	first strand
Strand 2	F	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	193	first strand
Strand 2	F	178	182	anti-parallel
Strand 3	F	143	151	anti-parallel
Strand 4	F	156	164	anti-parallel
Strand 5	F	205	206	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	C	106	110	parallel
Strand 3	C	49	54	parallel
Strand 4	C	127	130	parallel
Strand 5	C	162	166	parallel
Strand 6	C	181	186	parallel
Strand 7	C	239	247	parallel
Strand 8	C	252	256	anti-parallel
Strand 9	C	259	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	213	217	first strand
Strand 2	C	223	226	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	310	first strand
Strand 2	C	313	319	anti-parallel
Strand 3	C	419	424	parallel
Strand 4	C	340	345	parallel
Strand 5	C	375	378	parallel
Strand 6	C	399	401	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	48	54	anti-parallel
Strand 3	G	15	22	parallel
Strand 4	G	68	71	parallel
Strand 5	G	102	106	parallel
Strand 6	G	200	203	parallel
Strand 7	G	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	118	first strand
Strand 2	G	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	134	136	first strand
Strand 2	G	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	192	193	first strand
Strand 2	G	178	182	anti-parallel
Strand 3	G	143	151	anti-parallel
Strand 4	G	156	164	anti-parallel
Strand 5	G	205	206	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	106	110	parallel
Strand 3	D	49	54	parallel
Strand 4	D	127	130	parallel
Strand 5	D	162	166	parallel
Strand 6	D	181	186	parallel
Strand 7	D	239	247	parallel
Strand 8	D	252	256	anti-parallel
Strand 9	D	259	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	213	217	first strand
Strand 2	D	223	226	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	307	310	first strand
Strand 2	D	313	319	anti-parallel
Strand 3	D	419	424	parallel
Strand 4	D	340	345	parallel
Strand 5	D	375	378	parallel
Strand 6	D	399	401	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	48	54	anti-parallel
Strand 3	H	15	22	parallel
Strand 4	H	68	71	parallel
Strand 5	H	102	106	parallel
Strand 6	H	200	203	parallel
Strand 7	H	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	116	118	first strand
Strand 2	H	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	136	first strand
Strand 2	H	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	192	193	first strand
Strand 2	H	178	182	anti-parallel
Strand 3	H	143	151	anti-parallel
Strand 4	H	156	164	anti-parallel
Strand 5	H	205	206	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FQB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FQB