Analysis of interatomic Contacts of Structural Units in PDB entry:
6FQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FQL entry

There are 2 chains in PDB entry 6FQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 435PHE 824
B
 U 1 A 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6FQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
439 443Right-handed 310
Helix 2
AA2
A
447 450Right-handed 310
Helix 3
AA3
A
581 584Right-handed 310
Helix 4
AA4
A
628 631Right-handed 310
Helix 5
AA5
A
696 704Right-handed 310
Helix 6
AA6
A
770 772Right-handed 310
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There are 11 sheets in PDB entry 6FQL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 446first strand
Strand 2
A
459 464anti-parallel
Strand 3
A
503 508anti-parallel
Strand 4
A
495 498anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
532 537parallel
Strand 3
A
514 522anti-parallel
Strand 4
A
480 485anti-parallel
Strand 5
A
491 492anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
532 537parallel
Strand 3
A
514 522anti-parallel
Strand 4
A
525 526anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 553first strand
Strand 2
A
820 823anti-parallel
Strand 3
A
811 815anti-parallel
Strand 4
A
800 805anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 570first strand
Strand 2
A
576 580anti-parallel
Strand 3
A
585 589anti-parallel
Strand 4
A
595 599anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
623 627anti-parallel
Strand 3
A
632 636anti-parallel
Strand 4
A
642 646anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
659 664first strand
Strand 2
A
670 674anti-parallel
Strand 3
A
679 683anti-parallel
Strand 4
A
689 694anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
706 711first strand
Strand 2
A
717 721anti-parallel
Strand 3
A
726 730anti-parallel
Strand 4
A
737 740anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
742 743first strand
Strand 2
A
749 750parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 758first strand
Strand 2
A
764 768anti-parallel
Strand 3
A
773 777anti-parallel
Strand 4
A
783 787anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
789 790first strand
Strand 2
A
796 797parallel
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