Analysis of interatomic Contacts of Structural Units in PDB entry:
6FQQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FQQ entry

There are 8 chains in PDB entry 6FQQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 170LYS 229
L
 A 1 T 16
M
 A 1 T 16
B
 GLY 169LYS 229
G
 A 1 T 16
H
 A 1 T 16
D
 ALA 167LYS 229
E
 GLY 169LYS 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6FQQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
172 186Right-handed alpha
Helix 2
AA2
A
193 205Right-handed alpha
Helix 3
AA3
A
207 222Right-handed alpha
Helix 4
AA4
A
222 228Right-handed alpha
Helix 5
AA5
B
172 186Right-handed alpha
Helix 6
AA6
B
193 205Right-handed alpha
Helix 7
AA7
B
207 222Right-handed alpha
Helix 8
AA8
B
222 228Right-handed alpha
Helix 9
AA9
D
172 186Right-handed alpha
Helix 10
AB1
D
193 205Right-handed alpha
Helix 11
AB2
D
207 222Right-handed alpha
Helix 12
AB3
D
222 228Right-handed alpha
Helix 13
AB4
E
172 186Right-handed alpha
Helix 14
AB5
E
193 205Right-handed alpha
Helix 15
AB6
E
207 222Right-handed alpha
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There are no sheets in PDB entry 6FQQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il