Analysis of interatomic Contacts of Structural Units in PDB entry:
6FQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FQZ entry

There are 2 chains in PDB entry 6FQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 468
B
 MET 1TRP 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 6FQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
33 47Right-handed alpha
Helix 3
AA3
A
56 63Right-handed alpha
Helix 4
AA4
A
77 89Right-handed alpha
Helix 5
AA5
A
104 118Right-handed alpha
Helix 6
AA6
A
129 137Right-handed alpha
Helix 7
AA7
A
145 160Right-handed alpha
Helix 8
AA8
A
176 206Right-handed alpha
Helix 9
AA9
A
210 223Right-handed alpha
Helix 10
AB1
A
228 240Right-handed alpha
Helix 11
AB2
A
248 253Right-handed 310
Helix 12
AB3
A
261 274Right-handed alpha
Helix 13
AB4
A
277 291Right-handed alpha
Helix 14
AB5
A
292 303Right-handed alpha
Helix 15
AB6
A
318 350Right-handed alpha
Helix 16
AB7
A
354 362Right-handed alpha
Helix 17
AB8
A
371 383Right-handed alpha
Helix 18
AB9
A
388 391Right-handed 310
Helix 19
AC1
A
392 416Right-handed alpha
Helix 20
AC2
A
420 434Right-handed alpha
Helix 21
AC3
A
439 452Right-handed alpha
Helix 22
AC4
B
10 23Right-handed alpha
Helix 23
AC5
B
33 47Right-handed alpha
Helix 24
AC6
B
56 63Right-handed alpha
Helix 25
AC7
B
77 89Right-handed alpha
Helix 26
AC8
B
104 118Right-handed alpha
Helix 27
AC9
B
129 137Right-handed alpha
Helix 28
AD1
B
145 160Right-handed alpha
Helix 29
AD2
B
176 206Right-handed alpha
Helix 30
AD3
B
210 223Right-handed alpha
Helix 31
AD4
B
228 240Right-handed alpha
Helix 32
AD5
B
248 253Right-handed 310
Helix 33
AD6
B
261 274Right-handed alpha
Helix 34
AD7
B
277 292Right-handed alpha
Helix 35
AD8
B
292 303Right-handed alpha
Helix 36
AD9
B
318 350Right-handed alpha
Helix 37
AE1
B
354 362Right-handed alpha
Helix 38
AE2
B
371 383Right-handed alpha
Helix 39
AE3
B
388 391Right-handed 310
Helix 40
AE4
B
392 416Right-handed alpha
Helix 41
AE5
B
420 434Right-handed alpha
Helix 42
AE6
B
439 452Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 6FQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
27 30parallel
Strand 3
A
4 7parallel
Strand 4
A
69 72parallel
Strand 5
A
96 99parallel
Strand 6
A
121 128parallel
Strand 7
A
139 144anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
166 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 456first strand
Strand 2
A
463 464anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
27 30parallel
Strand 3
B
4 7parallel
Strand 4
B
69 72parallel
Strand 5
B
96 99parallel
Strand 6
B
121 128parallel
Strand 7
B
139 144anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
166 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 456first strand
Strand 2
B
463 464anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il