Analysis of interatomic Contacts of Structural Units in PDB entry:
6FRI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FRI entry

There are 4 chains in PDB entry 6FRI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 323
B
 MET 1LYS 323
C
 MET 1LYS 323
D
 MET 1ILE 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6FRI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 32Right-handed alpha
Helix 2
AA2
A
56 68Right-handed alpha
Helix 3
AA3
A
84 99Right-handed alpha
Helix 4
AA4
A
112 119Right-handed alpha
Helix 5
AA5
A
125 144Right-handed alpha
Helix 6
AA6
A
166 170Right-handed 310
Helix 7
AA7
A
178 189Right-handed alpha
Helix 8
AA8
A
199 217Right-handed alpha
Helix 9
AA9
A
237 257Right-handed alpha
Helix 10
AB1
A
261 273Right-handed alpha
Helix 11
AB2
A
282 292Right-handed alpha
Helix 12
AB3
A
306 322Right-handed alpha
Helix 13
AB4
B
16 32Right-handed alpha
Helix 14
AB5
B
56 68Right-handed alpha
Helix 15
AB6
B
84 99Right-handed alpha
Helix 16
AB7
B
112 119Right-handed alpha
Helix 17
AB8
B
125 144Right-handed alpha
Helix 18
AB9
B
166 170Right-handed 310
Helix 19
AC1
B
178 188Right-handed alpha
Helix 20
AC2
B
199 217Right-handed alpha
Helix 21
AC3
B
237 257Right-handed alpha
Helix 22
AC4
B
261 273Right-handed alpha
Helix 23
AC5
B
282 292Right-handed alpha
Helix 24
AC6
B
306 323Right-handed alpha
Helix 25
AC7
C
16 32Right-handed alpha
Helix 26
AC8
C
56 68Right-handed alpha
Helix 27
AC9
C
84 99Right-handed alpha
Helix 28
AD1
C
112 119Right-handed alpha
Helix 29
AD2
C
125 144Right-handed alpha
Helix 30
AD3
C
166 170Right-handed 310
Helix 31
AD4
C
178 188Right-handed alpha
Helix 32
AD5
C
199 217Right-handed alpha
Helix 33
AD6
C
237 257Right-handed alpha
Helix 34
AD7
C
261 273Right-handed alpha
Helix 35
AD8
C
282 292Right-handed alpha
Helix 36
AD9
C
306 323Right-handed alpha
Helix 37
AE1
D
16 32Right-handed alpha
Helix 38
AE2
D
56 68Right-handed alpha
Helix 39
AE3
D
84 99Right-handed alpha
Helix 40
AE4
D
112 119Right-handed alpha
Helix 41
AE5
D
125 144Right-handed alpha
Helix 42
AE6
D
166 170Right-handed 310
Helix 43
AE7
D
178 188Right-handed alpha
Helix 44
AE8
D
199 217Right-handed alpha
Helix 45
AE9
D
237 257Right-handed alpha
Helix 46
AF1
D
261 273Right-handed alpha
Helix 47
AF2
D
282 291Right-handed alpha
Helix 48
AF3
D
306 321Right-handed alpha
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There are 8 sheets in PDB entry 6FRI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
226 234parallel
Strand 3
A
294 300parallel
Strand 4
A
2 7parallel
Strand 5
A
40 43parallel
Strand 6
A
72 79parallel
Strand 7
A
103 108parallel
Strand 8
A
172 176parallel
Strand 9
A
192 194parallel
Strand 10
A
226 234parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
154 159anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
274 276first strand
Strand 2
B
226 234parallel
Strand 3
B
294 300parallel
Strand 4
B
2 7parallel
Strand 5
B
40 43parallel
Strand 6
B
72 79parallel
Strand 7
B
103 108parallel
Strand 8
B
172 176parallel
Strand 9
B
192 194parallel
Strand 10
B
226 234parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
154 159anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
274 276first strand
Strand 2
C
226 234parallel
Strand 3
C
294 300parallel
Strand 4
C
2 7parallel
Strand 5
C
40 43parallel
Strand 6
C
72 79parallel
Strand 7
C
103 108parallel
Strand 8
C
172 176parallel
Strand 9
C
192 194parallel
Strand 10
C
226 234parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 149first strand
Strand 2
C
154 159anti-parallel
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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
274 276first strand
Strand 2
D
226 234parallel
Strand 3
D
294 300parallel
Strand 4
D
2 7parallel
Strand 5
D
40 43parallel
Strand 6
D
72 79parallel
Strand 7
D
103 108parallel
Strand 8
D
172 176parallel
Strand 9
D
192 194parallel
Strand 10
D
226 234parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 149first strand
Strand 2
D
154 159anti-parallel
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