Analysis of interatomic Contacts of Structural Units in PDB entry:
6FRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FRV entry

There is 1 chain in PDB entry 6FRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 25PRO 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6FRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 45Right-handed alpha
Helix 2
AA2
A
77 93Right-handed alpha
Helix 3
AA3
A
95 97Right-handed 310
Helix 4
AA4
A
98 114Right-handed alpha
Helix 5
AA5
A
149 168Right-handed alpha
Helix 6
AA6
A
171 178Right-handed alpha
Helix 7
AA7
A
178 194Right-handed alpha
Helix 8
AA8
A
210 230Right-handed alpha
Helix 9
AA9
A
234 250Right-handed alpha
Helix 10
AB1
A
269 278Right-handed alpha
Helix 11
AB2
A
295 308Right-handed alpha
Helix 12
AB3
A
313 317Right-handed 310
Helix 13
AB4
A
334 338Right-handed 310
Helix 14
AB5
A
341 363Right-handed alpha
Helix 15
AB6
A
372 377Right-handed alpha
Helix 16
AB7
A
391 416Right-handed alpha
Helix 17
AB8
A
439 454Right-handed alpha
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There are 4 sheets in PDB entry 6FRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
132 133anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
206 209anti-parallel
Strand 3
A
260 261anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
385 386anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
433 434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il