Analysis of interatomic Contacts of Structural Units in PDB entry:
6FRW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FRW entry

There is 1 chain in PDB entry 6FRW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5LYS 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 6FRW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
77 81Right-handed 310
Helix 4
AA4
A
88 95Right-handed alpha
Helix 5
AA5
A
96 100Right-handed 310
Helix 6
AA6
A
233 238Right-handed alpha
Helix 7
AA7
A
249 253Right-handed 310
Helix 8
AA8
A
305 309Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 6FRW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
270 278parallel
Strand 3
A
255 262anti-parallel
Strand 4
A
215 222anti-parallel
Strand 5
A
202 208anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 49first strand
Strand 2
A
64 72anti-parallel
Strand 3
A
101 107anti-parallel
Strand 4
A
114 118anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
410 412parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 137first strand
Strand 2
A
143 151anti-parallel
Strand 3
A
155 166anti-parallel
Strand 4
A
171 174anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 137first strand
Strand 2
A
143 151anti-parallel
Strand 3
A
155 166anti-parallel
Strand 4
A
179 184anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 294first strand
Strand 2
A
297 304anti-parallel
Strand 3
A
318 324anti-parallel
Strand 4
A
332 333anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 294first strand
Strand 2
A
297 304anti-parallel
Strand 3
A
318 324anti-parallel
Strand 4
A
339 342anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 356first strand
Strand 2
A
361 370anti-parallel
Strand 3
A
376 382anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 356first strand
Strand 2
A
361 370anti-parallel
Strand 3
A
384 391anti-parallel
Strand 4
A
394 403anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il