Analysis of interatomic Contacts of Structural Units in PDB entry:
6FSH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FSH entry

There are 4 chains in PDB entry 6FSH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 7	TRP 398
B	SER 6	TRP 398
C	PRO 7	TRP 398
D	PRO 7	ALA 199

There are 87 helices in PDB entry 6FSH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	11	Right-handed 310
Helix 2	AA2	A	19	24	Right-handed alpha
Helix 3	AA3	A	47	57	Right-handed alpha
Helix 4	AA4	A	76	80	Right-handed 310
Helix 5	AA5	A	81	85	Right-handed 310
Helix 6	AA6	A	87	91	Right-handed 310
Helix 7	AA7	A	94	104	Right-handed alpha
Helix 8	AA8	A	105	107	Right-handed 310
Helix 9	AA9	A	108	134	Right-handed alpha
Helix 10	AB1	A	139	143	Right-handed alpha
Helix 11	AB2	A	146	157	Right-handed alpha
Helix 12	AB3	A	159	161	Right-handed 310
Helix 13	AB4	A	162	173	Right-handed alpha
Helix 14	AB5	A	179	204	Right-handed alpha
Helix 15	AB6	A	208	218	Right-handed alpha
Helix 16	AB7	A	222	237	Right-handed alpha
Helix 17	AB8	A	238	255	Right-handed alpha
Helix 18	AB9	A	256	263	Right-handed 310
Helix 19	AC1	A	265	281	Right-handed alpha
Helix 20	AC2	A	311	316	Right-handed alpha
Helix 21	AC3	A	342	346	Right-handed 310
Helix 22	AC4	A	349	368	Right-handed alpha
Helix 23	AC5	B	8	11	Right-handed 310
Helix 24	AC6	B	19	24	Right-handed alpha
Helix 25	AC7	B	47	57	Right-handed alpha
Helix 26	AC8	B	76	80	Right-handed 310
Helix 27	AC9	B	81	85	Right-handed 310
Helix 28	AD1	B	87	91	Right-handed 310
Helix 29	AD2	B	94	104	Right-handed alpha
Helix 30	AD3	B	105	107	Right-handed 310
Helix 31	AD4	B	108	134	Right-handed alpha
Helix 32	AD5	B	139	143	Right-handed alpha
Helix 33	AD6	B	146	157	Right-handed alpha
Helix 34	AD7	B	159	161	Right-handed 310
Helix 35	AD8	B	162	173	Right-handed alpha
Helix 36	AD9	B	179	204	Right-handed alpha
Helix 37	AE1	B	208	218	Right-handed alpha
Helix 38	AE2	B	222	237	Right-handed alpha
Helix 39	AE3	B	238	255	Right-handed alpha
Helix 40	AE4	B	256	263	Right-handed 310
Helix 41	AE5	B	265	281	Right-handed alpha
Helix 42	AE6	B	311	316	Right-handed alpha
Helix 43	AE7	B	342	346	Right-handed 310
Helix 44	AE8	B	349	368	Right-handed alpha
Helix 45	AE9	C	8	11	Right-handed 310
Helix 46	AF1	C	19	24	Right-handed alpha
Helix 47	AF2	C	47	57	Right-handed alpha
Helix 48	AF3	C	76	80	Right-handed 310
Helix 49	AF4	C	81	85	Right-handed 310
Helix 50	AF5	C	87	91	Right-handed 310
Helix 51	AF6	C	94	104	Right-handed alpha
Helix 52	AF7	C	105	107	Right-handed 310
Helix 53	AF8	C	108	134	Right-handed alpha
Helix 54	AF9	C	139	143	Right-handed alpha
Helix 55	AG1	C	146	157	Right-handed alpha
Helix 56	AG2	C	159	161	Right-handed 310
Helix 57	AG3	C	162	173	Right-handed alpha
Helix 58	AG4	C	179	204	Right-handed alpha
Helix 59	AG5	C	208	218	Right-handed alpha
Helix 60	AG6	C	222	237	Right-handed alpha
Helix 61	AG7	C	238	254	Right-handed alpha
Helix 62	AG8	C	255	263	Right-handed 310
Helix 63	AG9	C	265	281	Right-handed alpha
Helix 64	AH1	C	311	316	Right-handed alpha
Helix 65	AH2	C	342	346	Right-handed 310
Helix 66	AH3	C	349	368	Right-handed alpha
Helix 67	AH4	D	8	11	Right-handed 310
Helix 68	AH5	D	19	24	Right-handed alpha
Helix 69	AH6	D	47	57	Right-handed alpha
Helix 70	AH7	D	76	80	Right-handed 310
Helix 71	AH8	D	81	85	Right-handed 310
Helix 72	AH9	D	87	91	Right-handed 310
Helix 73	AI1	D	94	104	Right-handed alpha
Helix 74	AI2	D	105	107	Right-handed 310
Helix 75	AI3	D	108	134	Right-handed alpha
Helix 76	AI4	D	139	143	Right-handed alpha
Helix 77	AI5	D	146	157	Right-handed alpha
Helix 78	AI6	D	162	173	Right-handed alpha
Helix 79	AI7	D	179	204	Right-handed alpha
Helix 80	AI8	D	208	218	Right-handed alpha
Helix 81	AI9	D	222	237	Right-handed alpha
Helix 82	AJ1	D	238	254	Right-handed alpha
Helix 83	AJ2	D	255	263	Right-handed 310
Helix 84	AJ3	D	265	281	Right-handed alpha
Helix 85	AJ4	D	311	316	Right-handed alpha
Helix 86	AJ5	D	342	346	Right-handed 310
Helix 87	AJ6	D	349	368	Right-handed alpha

There are 20 sheets in PDB entry 6FSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	14	first strand
Strand 2	A	17	18	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	42	45	anti-parallel
Strand 3	A	307	310	parallel
Strand 4	A	289	291	anti-parallel
Strand 5	A	61	62	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	138	first strand
Strand 2	A	395	397	anti-parallel
Strand 3	A	372	373	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	297	first strand
Strand 2	A	300	302	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	383	first strand
Strand 2	A	390	393	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	14	first strand
Strand 2	B	17	18	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	42	45	anti-parallel
Strand 3	B	307	310	parallel
Strand 4	B	289	291	anti-parallel
Strand 5	B	61	62	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	138	first strand
Strand 2	B	395	397	anti-parallel
Strand 3	B	372	373	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	297	first strand
Strand 2	B	300	302	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	383	first strand
Strand 2	B	390	393	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	17	18	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	42	45	anti-parallel
Strand 3	C	307	310	parallel
Strand 4	C	289	291	anti-parallel
Strand 5	C	61	62	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	138	first strand
Strand 2	C	395	397	anti-parallel
Strand 3	C	372	373	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	297	first strand
Strand 2	C	300	302	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	381	383	first strand
Strand 2	C	390	393	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	14	first strand
Strand 2	D	17	18	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	41	45	anti-parallel
Strand 3	D	307	310	parallel
Strand 4	D	289	291	anti-parallel
Strand 5	D	61	62	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	138	first strand
Strand 2	D	395	397	anti-parallel
Strand 3	D	372	373	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	297	first strand
Strand 2	D	300	302	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	381	383	first strand
Strand 2	D	390	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FSH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FSH