Analysis of interatomic Contacts of Structural Units in PDB entry:
6FSN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FSN entry

There is 1 chain in PDB entry 6FSN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1198GLU 1473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6FSN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1208 1225Right-handed alpha
Helix 2
AA2
A
1237 1239Right-handed 310
Helix 3
AA3
A
1240 1255Right-handed alpha
Helix 4
AA4
A
1274 1285Right-handed alpha
Helix 5
AA5
A
1311 1316Right-handed alpha
Helix 6
AA6
A
1333 1343Right-handed 310
Helix 7
AA7
A
1344 1352Right-handed alpha
Helix 8
AA8
A
1366 1372Right-handed alpha
Helix 9
AA9
A
1373 1386Right-handed alpha
Helix 10
AB1
A
1394 1404Right-handed alpha
Helix 11
AB2
A
1413 1417Right-handed 310
Helix 12
AB3
A
1424 1431Right-handed 310
Helix 13
AB4
A
1445 1454Right-handed alpha
Helix 14
AB5
A
1456 1473Right-handed alpha
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There are 2 sheets in PDB entry 6FSN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1257 1261first strand
Strand 2
A
1230 1235parallel
Strand 3
A
1200 1204parallel
Strand 4
A
1297 1301parallel
Strand 5
A
1357 1365anti-parallel
Strand 6
A
1324 1328anti-parallel
Strand 7
A
1409 1411parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1306 1307first strand
Strand 2
A
1433 1434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il