Analysis of interatomic Contacts of Structural Units in PDB entry:
6FT7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FT7 entry

There are 2 chains in PDB entry 6FT7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 129	THR 484
B	SER 129	THR 484

There are 34 helices in PDB entry 6FT7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	177	179	Right-handed 310
Helix 2	AA2	A	191	212	Right-handed alpha
Helix 3	AA3	A	242	250	Right-handed alpha
Helix 4	AA4	A	256	277	Right-handed alpha
Helix 5	AA5	A	285	287	Right-handed 310
Helix 6	AA6	A	337	341	Right-handed 310
Helix 7	AA7	A	342	348	Right-handed alpha
Helix 8	AA8	A	353	370	Right-handed alpha
Helix 9	AA9	A	378	391	Right-handed alpha
Helix 10	AB1	A	394	401	Right-handed alpha
Helix 11	AB2	A	403	405	Right-handed 310
Helix 12	AB3	A	418	428	Right-handed alpha
Helix 13	AB4	A	430	435	Right-handed 310
Helix 14	AB5	A	439	453	Right-handed alpha
Helix 15	AB6	A	462	467	Right-handed alpha
Helix 16	AB7	A	468	475	Right-handed 310
Helix 17	AB8	A	476	482	Right-handed alpha
Helix 18	AB9	B	177	179	Right-handed 310
Helix 19	AC1	B	191	212	Right-handed alpha
Helix 20	AC2	B	242	250	Right-handed alpha
Helix 21	AC3	B	256	277	Right-handed alpha
Helix 22	AC4	B	285	287	Right-handed 310
Helix 23	AC5	B	337	341	Right-handed 310
Helix 24	AC6	B	342	347	Right-handed alpha
Helix 25	AC7	B	353	370	Right-handed alpha
Helix 26	AC8	B	378	391	Right-handed alpha
Helix 27	AC9	B	394	401	Right-handed alpha
Helix 28	AD1	B	403	405	Right-handed 310
Helix 29	AD2	B	418	428	Right-handed alpha
Helix 30	AD3	B	430	435	Right-handed 310
Helix 31	AD4	B	439	453	Right-handed alpha
Helix 32	AD5	B	462	467	Right-handed alpha
Helix 33	AD6	B	468	475	Right-handed 310
Helix 34	AD7	B	476	481	Right-handed alpha

There are 10 sheets in PDB entry 6FT7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	152	first strand
Strand 2	A	156	164	anti-parallel
Strand 3	A	168	175	anti-parallel
Strand 4	A	181	188	anti-parallel
Strand 5	A	231	237	anti-parallel
Strand 6	A	222	228	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	280	first strand
Strand 2	A	325	326	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	291	first strand
Strand 2	A	316	318	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	301	first strand
Strand 2	A	306	311	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	408	first strand
Strand 2	A	411	412	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	156	165	anti-parallel
Strand 3	B	168	175	anti-parallel
Strand 4	B	181	188	anti-parallel
Strand 5	B	231	237	anti-parallel
Strand 6	B	222	228	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	280	first strand
Strand 2	B	325	326	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	291	first strand
Strand 2	B	316	318	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	296	301	first strand
Strand 2	B	306	311	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	411	412	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FT7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FT7