Analysis of interatomic Contacts of Structural Units in PDB entry:
6FT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FT8 entry

There is 1 chain in PDB entry 6FT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1SER 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6FT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 151Right-handed 310
Helix 2
AA2
A
196 217Right-handed alpha
Helix 3
AA3
A
247 255Right-handed alpha
Helix 4
AA4
A
261 282Right-handed alpha
Helix 5
AA5
A
290 292Right-handed 310
Helix 6
AA6
A
342 346Right-handed 310
Helix 7
AA7
A
347 352Right-handed alpha
Helix 8
AA8
A
358 375Right-handed alpha
Helix 9
AA9
A
383 396Right-handed alpha
Helix 10
AB1
A
399 406Right-handed alpha
Helix 11
AB2
A
408 410Right-handed 310
Helix 12
AB3
A
423 433Right-handed alpha
Helix 13
AB4
A
435 440Right-handed 310
Helix 14
AB5
A
444 458Right-handed alpha
Helix 15
AB6
A
467 472Right-handed alpha
Helix 16
AB7
A
473 482Right-handed 310
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There are 5 sheets in PDB entry 6FT8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 157first strand
Strand 2
A
161 170anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
187 193anti-parallel
Strand 5
A
236 242anti-parallel
Strand 6
A
227 233anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
330 331anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
321 323anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 306first strand
Strand 2
A
311 316anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 413first strand
Strand 2
A
416 417anti-parallel
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