Analysis of interatomic Contacts of Structural Units in PDB entry:
6FT9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FT9 entry

There are 3 chains in PDB entry 6FT9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 0	LYS 482
B	SER -1	LYS 482
C	SER -1	LYS 482

There are 47 helices in PDB entry 6FT9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	196	217	Right-handed alpha
Helix 2	AA2	A	247	255	Right-handed alpha
Helix 3	AA3	A	261	282	Right-handed alpha
Helix 4	AA4	A	290	292	Right-handed 310
Helix 5	AA5	A	307	310	Right-handed 310
Helix 6	AA6	A	342	346	Right-handed 310
Helix 7	AA7	A	347	352	Right-handed alpha
Helix 8	AA8	A	358	375	Right-handed alpha
Helix 9	AA9	A	383	396	Right-handed alpha
Helix 10	AB1	A	399	406	Right-handed alpha
Helix 11	AB2	A	408	410	Right-handed 310
Helix 12	AB3	A	423	433	Right-handed alpha
Helix 13	AB4	A	435	440	Right-handed 310
Helix 14	AB5	A	444	458	Right-handed alpha
Helix 15	AB6	A	467	472	Right-handed alpha
Helix 16	AB7	A	473	481	Right-handed 310
Helix 17	AB8	B	-1	150	Right-handed 310
Helix 18	AB9	B	196	217	Right-handed alpha
Helix 19	AC1	B	247	255	Right-handed alpha
Helix 20	AC2	B	261	282	Right-handed alpha
Helix 21	AC3	B	290	292	Right-handed 310
Helix 22	AC4	B	342	346	Right-handed 310
Helix 23	AC5	B	347	352	Right-handed alpha
Helix 24	AC6	B	358	375	Right-handed alpha
Helix 25	AC7	B	383	396	Right-handed alpha
Helix 26	AC8	B	399	406	Right-handed alpha
Helix 27	AC9	B	408	410	Right-handed 310
Helix 28	AD1	B	423	433	Right-handed alpha
Helix 29	AD2	B	435	440	Right-handed 310
Helix 30	AD3	B	444	458	Right-handed alpha
Helix 31	AD4	B	467	472	Right-handed alpha
Helix 32	AD5	B	473	481	Right-handed 310
Helix 33	AD6	C	-1	150	Right-handed 310
Helix 34	AD7	C	196	217	Right-handed alpha
Helix 35	AD8	C	247	255	Right-handed alpha
Helix 36	AD9	C	261	282	Right-handed alpha
Helix 37	AE1	C	290	292	Right-handed 310
Helix 38	AE2	C	347	352	Right-handed alpha
Helix 39	AE3	C	358	375	Right-handed alpha
Helix 40	AE4	C	383	396	Right-handed alpha
Helix 41	AE5	C	399	406	Right-handed alpha
Helix 42	AE6	C	408	410	Right-handed 310
Helix 43	AE7	C	423	433	Right-handed alpha
Helix 44	AE8	C	435	440	Right-handed 310
Helix 45	AE9	C	444	458	Right-handed alpha
Helix 46	AF1	C	467	472	Right-handed alpha
Helix 47	AF2	C	473	481	Right-handed 310

There are 15 sheets in PDB entry 6FT9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	157	first strand
Strand 2	A	161	170	anti-parallel
Strand 3	A	173	180	anti-parallel
Strand 4	A	186	193	anti-parallel
Strand 5	A	236	242	anti-parallel
Strand 6	A	227	233	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	285	first strand
Strand 2	A	330	331	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	296	first strand
Strand 2	A	321	323	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	306	first strand
Strand 2	A	311	316	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	413	first strand
Strand 2	A	416	417	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	157	first strand
Strand 2	B	161	170	anti-parallel
Strand 3	B	173	180	anti-parallel
Strand 4	B	187	193	anti-parallel
Strand 5	B	236	242	anti-parallel
Strand 6	B	227	233	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	285	first strand
Strand 2	B	330	331	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	294	296	first strand
Strand 2	B	321	323	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	306	first strand
Strand 2	B	311	316	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	413	first strand
Strand 2	B	416	417	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	157	first strand
Strand 2	C	161	170	anti-parallel
Strand 3	C	173	180	anti-parallel
Strand 4	C	187	193	anti-parallel
Strand 5	C	236	242	anti-parallel
Strand 6	C	227	233	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	285	first strand
Strand 2	C	330	331	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	294	296	first strand
Strand 2	C	321	323	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	306	first strand
Strand 2	C	311	316	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	413	first strand
Strand 2	C	416	417	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FT9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FT9