Analysis of interatomic Contacts of Structural Units in PDB entry:
6FTH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FTH entry

There is 1 chain in PDB entry 6FTH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 15LYS 510
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6FTH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 35Right-handed 310
Helix 2
AA2
A
36 47Right-handed alpha
Helix 3
AA3
A
57 71Right-handed alpha
Helix 4
AA4
A
82 89Right-handed alpha
Helix 5
AA5
A
90 93Right-handed 310
Helix 6
AA6
A
95 102Right-handed 310
Helix 7
AA7
A
103 113Right-handed alpha
Helix 8
AA8
A
113 121Right-handed alpha
Helix 9
AA9
A
135 139Right-handed 310
Helix 10
AB1
A
149 156Right-handed alpha
Helix 11
AB2
A
162 176Right-handed alpha
Helix 12
AB3
A
202 211Right-handed 310
Helix 13
AB4
A
220 223Right-handed 310
Helix 14
AB5
A
238 254Right-handed alpha
Helix 15
AB6
A
265 275Right-handed alpha
Helix 16
AB7
A
289 295Right-handed alpha
Helix 17
AB8
A
296 299Right-handed 310
Helix 18
AB9
A
313 317Right-handed 310
Helix 19
AC1
A
339 351Right-handed alpha
Helix 20
AC2
A
352 362Right-handed alpha
Helix 21
AC3
A
379 389Right-handed alpha
Helix 22
AC4
A
395 399Right-handed 310
Helix 23
AC5
A
412 423Right-handed alpha
Helix 24
AC6
A
425 430Right-handed alpha
Helix 25
AC7
A
446 475Right-handed alpha
Helix 26
AC8
A
476 491Right-handed alpha
Helix 27
AC9
A
492 509Right-handed alpha
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There are 4 sheets in PDB entry 6FTH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 56first strand
Strand 2
A
19 26parallel
Strand 3
A
76 78parallel
Strand 4
A
326 333anti-parallel
Strand 5
A
130 133anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
282 287parallel
Strand 3
A
144 148anti-parallel
Strand 4
A
301 303anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 228first strand
Strand 2
A
231 234anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 372first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
408 410parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il