Analysis of interatomic Contacts of Structural Units in PDB entry:
6FTL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FTL entry

There are 17 chains in PDB entry 6FTL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	LEU 149
A	THR 151	GLY 154
A	ALA 156	LEU 173
A	GLY 175	LEU 197
A	GLY 199	LEU 204
A	ASP 206	ILE 345
A	GLY 347	GLU 484
I	MET 1	TYR 139
C	GLN 3	LEU 149
C	THR 151	GLY 154
C	ALA 156	LEU 173
C	GLY 175	LEU 197
C	GLY 199	LEU 204
C	ASP 206	ILE 345
C	GLY 347	GLU 484
J	MET 1	TYR 139
E	GLN 3	ASP 30

There are106 helices in PDB entry 6FTL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	9	Right-handed alpha
Helix 2	AA2	A	22	26	Right-handed 310
Helix 3	AA3	A	53	65	Right-handed alpha
Helix 4	AA4	A	73	79	Right-handed 310
Helix 5	AA5	A	80	85	Right-handed alpha
Helix 6	AA6	A	108	112	Right-handed 310
Helix 7	AA7	A	116	126	Right-handed alpha
Helix 8	AA8	A	127	131	Right-handed 310
Helix 9	AA9	A	145	150	Right-handed alpha
Helix 10	AB1	A	158	167	Right-handed alpha
Helix 11	AB2	A	185	199	Right-handed alpha
Helix 12	AB3	A	217	237	Right-handed alpha
Helix 13	AB4	A	250	264	Right-handed alpha
Helix 14	AB5	A	276	290	Right-handed alpha
Helix 15	AB6	A	301	306	Right-handed alpha
Helix 16	AB7	A	313	325	Right-handed alpha
Helix 17	AB8	A	341	354	Right-handed alpha
Helix 18	AB9	A	386	388	Right-handed 310
Helix 19	AC1	A	389	398	Right-handed alpha
Helix 20	AC2	A	406	411	Right-handed alpha
Helix 21	AC3	A	415	437	Right-handed alpha
Helix 22	AC4	A	444	454	Right-handed alpha
Helix 23	AC5	A	457	467	Right-handed alpha
Helix 24	AC6	I	15	29	Right-handed alpha
Helix 25	AC7	I	60	75	Right-handed alpha
Helix 26	AC8	I	128	133	Right-handed alpha
Helix 27	AC9	C	4	10	Right-handed alpha
Helix 28	AD1	C	22	26	Right-handed 310
Helix 29	AD2	C	53	65	Right-handed alpha
Helix 30	AD3	C	73	79	Right-handed 310
Helix 31	AD4	C	80	85	Right-handed alpha
Helix 32	AD5	C	108	112	Right-handed 310
Helix 33	AD6	C	116	126	Right-handed alpha
Helix 34	AD7	C	145	150	Right-handed alpha
Helix 35	AD8	C	157	167	Right-handed alpha
Helix 36	AD9	C	185	199	Right-handed alpha
Helix 37	AE1	C	217	237	Right-handed alpha
Helix 38	AE2	C	250	264	Right-handed alpha
Helix 39	AE3	C	276	290	Right-handed alpha
Helix 40	AE4	C	301	306	Right-handed alpha
Helix 41	AE5	C	313	325	Right-handed alpha
Helix 42	AE6	C	341	354	Right-handed alpha
Helix 43	AE7	C	360	364	Right-handed 310
Helix 44	AE8	C	386	388	Right-handed 310
Helix 45	AE9	C	389	398	Right-handed alpha
Helix 46	AF1	C	406	411	Right-handed alpha
Helix 47	AF2	C	415	436	Right-handed alpha
Helix 48	AF3	C	444	456	Right-handed alpha
Helix 49	AF4	C	457	467	Right-handed alpha
Helix 50	AF5	J	15	29	Right-handed alpha
Helix 51	AF6	J	60	75	Right-handed alpha
Helix 52	AF7	J	128	133	Right-handed alpha
Helix 53	AF8	E	4	9	Right-handed alpha
Helix 54	AF9	E	22	27	Right-handed 310
Helix 55	AG1	E	53	65	Right-handed alpha
Helix 56	AG2	E	73	79	Right-handed 310
Helix 57	AG3	E	80	85	Right-handed alpha
Helix 58	AG4	E	108	112	Right-handed 310
Helix 59	AG5	E	116	125	Right-handed alpha
Helix 60	AG6	E	127	131	Right-handed 310
Helix 61	AG7	E	145	150	Right-handed alpha
Helix 62	AG8	E	157	167	Right-handed alpha
Helix 63	AG9	E	185	199	Right-handed alpha
Helix 64	AH1	E	217	237	Right-handed alpha
Helix 65	AH2	E	250	264	Right-handed alpha
Helix 66	AH3	E	276	290	Right-handed alpha
Helix 67	AH4	E	301	306	Right-handed alpha
Helix 68	AH5	E	313	325	Right-handed alpha
Helix 69	AH6	E	341	354	Right-handed alpha
Helix 70	AH7	E	360	364	Right-handed 310
Helix 71	AH8	E	386	388	Right-handed 310
Helix 72	AH9	E	389	398	Right-handed alpha
Helix 73	AI1	E	405	411	Right-handed alpha
Helix 74	AI2	E	415	436	Right-handed alpha
Helix 75	AI3	E	444	455	Right-handed alpha
Helix 76	AI4	E	457	468	Right-handed alpha
Helix 77	AI5	K	15	29	Right-handed alpha
Helix 78	AI6	K	60	75	Right-handed alpha
Helix 79	AI7	K	128	133	Right-handed alpha
Helix 80	AI8	G	4	10	Right-handed alpha
Helix 81	AI9	G	22	26	Right-handed 310
Helix 82	AJ1	G	53	65	Right-handed alpha
Helix 83	AJ2	G	73	79	Right-handed 310
Helix 84	AJ3	G	80	85	Right-handed alpha
Helix 85	AJ4	G	108	112	Right-handed 310
Helix 86	AJ5	G	116	125	Right-handed alpha
Helix 87	AJ6	G	127	131	Right-handed 310
Helix 88	AJ7	G	145	150	Right-handed alpha
Helix 89	AJ8	G	157	167	Right-handed alpha
Helix 90	AJ9	G	185	199	Right-handed alpha
Helix 91	AK1	G	217	237	Right-handed alpha
Helix 92	AK2	G	250	264	Right-handed alpha
Helix 93	AK3	G	276	290	Right-handed alpha
Helix 94	AK4	G	301	306	Right-handed alpha
Helix 95	AK5	G	313	325	Right-handed alpha
Helix 96	AK6	G	341	354	Right-handed alpha
Helix 97	AK7	G	360	364	Right-handed 310
Helix 98	AK8	G	386	388	Right-handed 310
Helix 99	AK9	G	389	398	Right-handed alpha
Helix 100	AL1	G	406	411	Right-handed alpha
Helix 101	AL2	G	415	436	Right-handed alpha
Helix 102	AL3	G	444	455	Right-handed alpha
Helix 103	AL4	G	457	468	Right-handed alpha
Helix 104	AL5	L	15	29	Right-handed alpha
Helix 105	AL6	L	60	75	Right-handed alpha
Helix 106	AL7	L	128	133	Right-handed alpha

There are 20 sheets in PDB entry 6FTL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	93	first strand
Strand 2	A	101	107	anti-parallel
Strand 3	A	40	48	anti-parallel
Strand 4	A	134	143	anti-parallel
Strand 5	A	311	312	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	175	first strand
Strand 2	A	402	404	parallel
Strand 3	A	378	382	parallel
Strand 4	A	328	330	parallel
Strand 5	A	293	297	parallel
Strand 6	A	268	272	parallel
Strand 7	A	241	245	parallel
Strand 8	A	203	205	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	357	first strand
Strand 2	A	369	370	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	49	55	first strand
Strand 2	I	32	38	anti-parallel
Strand 3	I	79	86	anti-parallel
Strand 4	I	93	101	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	109	115	first strand
Strand 2	I	121	127	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	93	first strand
Strand 2	C	101	107	anti-parallel
Strand 3	C	40	48	anti-parallel
Strand 4	C	134	143	anti-parallel
Strand 5	C	311	312	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	175	first strand
Strand 2	C	402	404	parallel
Strand 3	C	378	381	parallel
Strand 4	C	328	330	parallel
Strand 5	C	293	297	parallel
Strand 6	C	268	272	parallel
Strand 7	C	241	245	parallel
Strand 8	C	203	205	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	357	first strand
Strand 2	C	369	370	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	49	50	first strand
Strand 2	J	32	38	anti-parallel
Strand 3	J	79	86	anti-parallel
Strand 4	J	93	101	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	109	115	first strand
Strand 2	J	121	127	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	93	first strand
Strand 2	E	101	107	anti-parallel
Strand 3	E	40	48	anti-parallel
Strand 4	E	134	143	anti-parallel
Strand 5	E	311	312	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	173	175	first strand
Strand 2	E	402	404	parallel
Strand 3	E	378	382	parallel
Strand 4	E	328	330	parallel
Strand 5	E	293	297	parallel
Strand 6	E	268	272	parallel
Strand 7	E	241	245	parallel
Strand 8	E	203	205	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	356	357	first strand
Strand 2	E	369	370	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	49	50	first strand
Strand 2	K	32	38	anti-parallel
Strand 3	K	79	86	anti-parallel
Strand 4	K	93	101	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	109	115	first strand
Strand 2	K	121	127	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	87	93	first strand
Strand 2	G	101	107	anti-parallel
Strand 3	G	40	48	anti-parallel
Strand 4	G	134	143	anti-parallel
Strand 5	G	311	312	parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	173	175	first strand
Strand 2	G	402	404	parallel
Strand 3	G	378	382	parallel
Strand 4	G	328	330	parallel
Strand 5	G	293	297	parallel
Strand 6	G	268	272	parallel
Strand 7	G	241	245	parallel
Strand 8	G	203	205	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	356	357	first strand
Strand 2	G	369	370	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	49	50	first strand
Strand 2	L	32	38	anti-parallel
Strand 3	L	79	86	anti-parallel
Strand 4	L	93	101	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	109	115	first strand
Strand 2	L	121	127	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FTL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FTL