Analysis of interatomic Contacts of Structural Units in PDB entry:
6FU4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FU4 entry

There are 4 chains in PDB entry 6FU4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 48	PRO 344
B	ASP 51	LEU 341
C	GLN 48	GLY 343
D	GLU 52	LEU 341

There are 48 helices in PDB entry 6FU4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	96	Right-handed alpha
Helix 2	AA2	A	100	118	Right-handed alpha
Helix 3	AA3	A	137	142	Right-handed 310
Helix 4	AA4	A	144	148	Right-handed 310
Helix 5	AA5	A	173	178	Right-handed alpha
Helix 6	AA6	A	190	200	Right-handed alpha
Helix 7	AA7	A	242	255	Right-handed alpha
Helix 8	AA8	A	256	260	Right-handed 310
Helix 9	AA9	A	278	282	Right-handed 310
Helix 10	AB1	A	285	289	Right-handed 310
Helix 11	AB2	A	293	303	Right-handed alpha
Helix 12	AB3	A	338	342	Right-handed alpha
Helix 13	AB4	B	52	96	Right-handed alpha
Helix 14	AB5	B	100	118	Right-handed alpha
Helix 15	AB6	B	137	141	Right-handed 310
Helix 16	AB7	B	144	148	Right-handed 310
Helix 17	AB8	B	173	178	Right-handed alpha
Helix 18	AB9	B	190	200	Right-handed alpha
Helix 19	AC1	B	242	255	Right-handed alpha
Helix 20	AC2	B	256	260	Right-handed 310
Helix 21	AC3	B	278	282	Right-handed 310
Helix 22	AC4	B	285	289	Right-handed 310
Helix 23	AC5	B	293	303	Right-handed alpha
Helix 24	AC6	B	339	341	Right-handed 310
Helix 25	AC7	C	49	96	Right-handed alpha
Helix 26	AC8	C	100	118	Right-handed alpha
Helix 27	AC9	C	137	142	Right-handed 310
Helix 28	AD1	C	144	148	Right-handed 310
Helix 29	AD2	C	173	178	Right-handed alpha
Helix 30	AD3	C	190	200	Right-handed alpha
Helix 31	AD4	C	242	255	Right-handed alpha
Helix 32	AD5	C	256	260	Right-handed 310
Helix 33	AD6	C	278	282	Right-handed 310
Helix 34	AD7	C	285	290	Right-handed alpha
Helix 35	AD8	C	293	304	Right-handed alpha
Helix 36	AD9	C	338	342	Right-handed alpha
Helix 37	AE1	D	54	96	Right-handed alpha
Helix 38	AE2	D	100	118	Right-handed alpha
Helix 39	AE3	D	137	142	Right-handed 310
Helix 40	AE4	D	144	148	Right-handed 310
Helix 41	AE5	D	173	178	Right-handed alpha
Helix 42	AE6	D	190	200	Right-handed alpha
Helix 43	AE7	D	242	255	Right-handed alpha
Helix 44	AE8	D	256	260	Right-handed 310
Helix 45	AE9	D	278	282	Right-handed 310
Helix 46	AF1	D	285	289	Right-handed 310
Helix 47	AF2	D	293	303	Right-handed alpha
Helix 48	AF3	D	339	341	Right-handed 310

There are 12 sheets in PDB entry 6FU4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	171	first strand
Strand 2	A	156	161	anti-parallel
Strand 3	A	124	129	anti-parallel
Strand 4	A	231	241	anti-parallel
Strand 5	A	215	228	anti-parallel
Strand 6	A	203	204	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	171	first strand
Strand 2	A	156	161	anti-parallel
Strand 3	A	124	129	anti-parallel
Strand 4	A	231	241	anti-parallel
Strand 5	A	215	228	anti-parallel
Strand 6	A	208	212	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	275	first strand
Strand 2	A	262	266	anti-parallel
Strand 3	A	330	337	anti-parallel
Strand 4	A	314	321	anti-parallel
Strand 5	A	307	311	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	171	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	124	129	anti-parallel
Strand 4	B	231	241	anti-parallel
Strand 5	B	215	228	anti-parallel
Strand 6	B	203	204	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	171	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	124	129	anti-parallel
Strand 4	B	231	241	anti-parallel
Strand 5	B	215	228	anti-parallel
Strand 6	B	208	212	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	275	first strand
Strand 2	B	262	266	anti-parallel
Strand 3	B	330	337	anti-parallel
Strand 4	B	314	321	anti-parallel
Strand 5	B	307	310	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	171	first strand
Strand 2	C	156	161	anti-parallel
Strand 3	C	124	129	anti-parallel
Strand 4	C	231	241	anti-parallel
Strand 5	C	215	228	anti-parallel
Strand 6	C	203	204	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	171	first strand
Strand 2	C	156	161	anti-parallel
Strand 3	C	124	129	anti-parallel
Strand 4	C	231	241	anti-parallel
Strand 5	C	215	228	anti-parallel
Strand 6	C	208	212	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	272	275	first strand
Strand 2	C	262	266	anti-parallel
Strand 3	C	330	337	anti-parallel
Strand 4	C	314	321	anti-parallel
Strand 5	C	307	310	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	171	first strand
Strand 2	D	156	163	anti-parallel
Strand 3	D	124	129	anti-parallel
Strand 4	D	231	241	anti-parallel
Strand 5	D	215	228	anti-parallel
Strand 6	D	203	204	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	171	first strand
Strand 2	D	156	163	anti-parallel
Strand 3	D	124	129	anti-parallel
Strand 4	D	231	241	anti-parallel
Strand 5	D	215	228	anti-parallel
Strand 6	D	208	212	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	272	275	first strand
Strand 2	D	262	266	anti-parallel
Strand 3	D	330	337	anti-parallel
Strand 4	D	314	321	anti-parallel
Strand 5	D	307	310	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FU4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FU4