Analysis of interatomic Contacts of Structural Units in PDB entry:
6FU9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FU9 entry

There are 4 chains in PDB entry 6FU9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 186ASP 264
B
 LYS 30PHE 113
C
 GLY 186ASP 264
D
 TYR 27PHE 113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6FU9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
200 213Right-handed alpha
Helix 2
AA2
A
238 250Right-handed alpha
Helix 3
AA3
B
34 38Right-handed 310
Helix 4
AA4
C
200 213Right-handed alpha
Helix 5
AA5
C
238 250Right-handed alpha
Helix 6
AA6
D
34 38Right-handed 310
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There are 4 sheets in PDB entry 6FU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 223first strand
Strand 2
A
229 234anti-parallel
Strand 3
A
190 195anti-parallel
Strand 4
A
254 260anti-parallel
Strand 5
B
74 80anti-parallel
Strand 6
B
83 89anti-parallel
Strand 7
B
95 96anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 70first strand
Strand 2
B
54 60anti-parallel
Strand 3
B
103 109anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
217 223first strand
Strand 2
C
229 234anti-parallel
Strand 3
C
190 195anti-parallel
Strand 4
C
254 260anti-parallel
Strand 5
D
74 80anti-parallel
Strand 6
D
83 89anti-parallel
Strand 7
D
95 96anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
63 70first strand
Strand 2
D
54 60anti-parallel
Strand 3
D
103 109anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il