Analysis of interatomic Contacts of Structural Units in PDB entry:
6FUW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FUW entry

There are 4 chains in PDB entry 6FUW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN -1	PHE 1443
B	LEU 41	LYS 410
C	MET 1	ILE 115
D	A 1	G 8

There are 14 helices in PDB entry 6FUW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	506	509	Right-handed 310
Helix 2	AA2	A	1352	1370	Right-handed alpha
Helix 3	AA3	A	1372	1376	Right-handed 310
Helix 4	AA4	A	1379	1383	Right-handed 310
Helix 5	AA5	A	1403	1410	Right-handed 310
Helix 6	AA6	A	1411	1423	Right-handed alpha
Helix 7	AA7	A	1425	1440	Right-handed alpha
Helix 8	AA8	B	59	71	Right-handed alpha
Helix 9	AA9	B	94	98	Right-handed 310
Helix 10	AB1	B	101	106	Right-handed 310
Helix 11	AB2	C	13	20	Right-handed alpha
Helix 12	AB3	C	41	46	Right-handed alpha
Helix 13	AB4	C	70	74	Right-handed 310
Helix 14	AB5	C	96	101	Right-handed alpha

There are 28 sheets in PDB entry 6FUW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	9	first strand
Strand 2	A	1345	1350	anti-parallel
Strand 3	A	1335	1340	anti-parallel
Strand 4	A	1308	1314	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	20	first strand
Strand 2	A	29	33	anti-parallel
Strand 3	A	37	43	anti-parallel
Strand 4	A	66	73	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	84	first strand
Strand 2	A	93	97	anti-parallel
Strand 3	A	102	109	anti-parallel
Strand 4	A	114	122	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	149	154	anti-parallel
Strand 3	A	158	163	anti-parallel
Strand 4	A	189	192	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	208	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	238	244	anti-parallel
Strand 4	A	254	261	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	271	first strand
Strand 2	A	277	282	anti-parallel
Strand 3	A	285	290	anti-parallel
Strand 4	A	293	299	anti-parallel
Strand 5	A	313	314	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	328	first strand
Strand 2	A	334	338	anti-parallel
Strand 3	A	343	350	anti-parallel
Strand 4	A	359	361	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	328	first strand
Strand 2	A	334	338	anti-parallel
Strand 3	A	343	350	anti-parallel
Strand 4	A	364	367	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	376	first strand
Strand 2	A	381	385	anti-parallel
Strand 3	A	391	398	anti-parallel
Strand 4	A	461	469	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	481	first strand
Strand 2	A	499	504	anti-parallel
Strand 3	A	510	515	anti-parallel
Strand 4	A	1013	1028	anti-parallel
Strand 5	A	1033	1043	anti-parallel
Strand 6	A	1070	1079	anti-parallel
Strand 7	A	1092	1093	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	522	526	first strand
Strand 2	A	996	1000	anti-parallel
Strand 3	A	986	990	anti-parallel
Strand 4	A	974	978	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	539	first strand
Strand 2	A	572	578	anti-parallel
Strand 3	A	583	586	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	610	first strand
Strand 2	A	618	622	anti-parallel
Strand 3	A	625	629	anti-parallel
Strand 4	A	634	639	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	652	first strand
Strand 2	A	655	660	anti-parallel
Strand 3	A	665	671	anti-parallel
Strand 4	A	681	685	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	695	703	first strand
Strand 2	A	782	789	anti-parallel
Strand 3	A	794	798	anti-parallel
Strand 4	A	803	808	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	817	818	first strand
Strand 2	A	890	895	anti-parallel
Strand 3	A	870	878	anti-parallel
Strand 4	A	860	867	anti-parallel
Strand 5	A	848	854	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	931	935	first strand
Strand 2	A	941	945	anti-parallel
Strand 3	A	951	955	anti-parallel
Strand 4	A	962	965	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1098	1109	first strand
Strand 2	A	1117	1127	anti-parallel
Strand 3	A	1136	1146	anti-parallel
Strand 4	A	1158	1168	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1172	1177	first strand
Strand 2	A	1182	1186	anti-parallel
Strand 3	A	1189	1195	anti-parallel
Strand 4	A	1200	1207	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1212	1218	first strand
Strand 2	A	1221	1226	anti-parallel
Strand 3	A	1231	1235	anti-parallel
Strand 4	A	1244	1248	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1255	1263	first strand
Strand 2	A	1266	1273	anti-parallel
Strand 3	A	1277	1282	anti-parallel
Strand 4	A	1297	1303	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	113	first strand
Strand 2	B	399	403	anti-parallel
Strand 3	B	389	394	anti-parallel
Strand 4	B	378	383	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	127	first strand
Strand 2	B	133	138	anti-parallel
Strand 3	B	142	147	anti-parallel
Strand 4	B	153	158	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	169	first strand
Strand 2	B	176	179	anti-parallel
Strand 3	B	184	188	anti-parallel
Strand 4	B	194	199	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	210	first strand
Strand 2	B	216	221	anti-parallel
Strand 3	B	226	230	anti-parallel
Strand 4	B	236	240	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	251	first strand
Strand 2	B	259	263	anti-parallel
Strand 3	B	270	273	anti-parallel
Strand 4	B	283	284	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	296	first strand
Strand 2	B	302	307	anti-parallel
Strand 3	B	312	316	anti-parallel
Strand 4	B	325	327	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	339	first strand
Strand 2	B	346	351	anti-parallel
Strand 3	B	356	360	anti-parallel
Strand 4	B	368	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FUW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FUW