Analysis of interatomic Contacts of Structural Units in PDB entry:
6FV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FV1 entry

There are 3 chains in PDB entry 6FV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1VAL 300
B
 SER 1GLY 299
C
 SER 1GLY 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6FV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
41 44Right-handed 310
Helix 3
AA3
A
52 59Right-handed alpha
Helix 4
AA4
A
61 63Right-handed 310
Helix 5
AA5
A
181 185Right-handed 310
Helix 6
AA6
A
200 214Right-handed alpha
Helix 7
AA7
A
226 237Right-handed alpha
Helix 8
AA8
A
244 247Right-handed 310
Helix 9
AA9
A
248 256Right-handed alpha
Helix 10
AB1
A
258 270Right-handed alpha
Helix 11
AB2
A
289 299Right-handed alpha
Helix 12
AB3
B
10 15Right-handed alpha
Helix 13
AB4
B
41 44Right-handed 310
Helix 14
AB5
B
52 59Right-handed alpha
Helix 15
AB6
B
61 63Right-handed 310
Helix 16
AB7
B
181 185Right-handed 310
Helix 17
AB8
B
200 214Right-handed alpha
Helix 18
AB9
B
226 238Right-handed alpha
Helix 19
AC1
B
244 247Right-handed 310
Helix 20
AC2
B
248 256Right-handed alpha
Helix 21
AC3
B
258 271Right-handed alpha
Helix 22
AC4
B
289 299Right-handed alpha
Helix 23
AC5
C
10 15Right-handed alpha
Helix 24
AC6
C
41 44Right-handed 310
Helix 25
AC7
C
52 59Right-handed alpha
Helix 26
AC8
C
61 63Right-handed 310
Helix 27
AC9
C
181 185Right-handed 310
Helix 28
AD1
C
200 214Right-handed alpha
Helix 29
AD2
C
226 238Right-handed alpha
Helix 30
AD3
C
244 247Right-handed 310
Helix 31
AD4
C
248 256Right-handed alpha
Helix 32
AD5
C
258 271Right-handed alpha
Helix 33
AD6
C
289 299Right-handed alpha
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There are 9 sheets in PDB entry 6FV1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
65 69anti-parallel
Strand 3
A
17 22anti-parallel
Strand 4
A
25 32anti-parallel
Strand 5
A
35 39anti-parallel
Strand 6
A
85 90anti-parallel
Strand 7
A
76 82anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
157 166parallel
Strand 3
A
147 151anti-parallel
Strand 4
A
110 117anti-parallel
Strand 5
A
120 128anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
157 166parallel
Strand 3
A
172 175anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 74first strand
Strand 2
B
65 69anti-parallel
Strand 3
B
17 22anti-parallel
Strand 4
B
25 32anti-parallel
Strand 5
B
35 39anti-parallel
Strand 6
B
85 90anti-parallel
Strand 7
B
76 82anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 102first strand
Strand 2
B
157 166parallel
Strand 3
B
147 151anti-parallel
Strand 4
B
110 117anti-parallel
Strand 5
B
120 128anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 102first strand
Strand 2
B
157 166parallel
Strand 3
B
172 175anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 74first strand
Strand 2
C
65 69anti-parallel
Strand 3
C
17 22anti-parallel
Strand 4
C
25 32anti-parallel
Strand 5
C
35 39anti-parallel
Strand 6
C
85 90anti-parallel
Strand 7
C
76 82anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 102first strand
Strand 2
C
157 166parallel
Strand 3
C
147 151anti-parallel
Strand 4
C
110 117anti-parallel
Strand 5
C
120 128anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 102first strand
Strand 2
C
157 166parallel
Strand 3
C
172 175anti-parallel
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