Analysis of interatomic Contacts of Structural Units in PDB entry:
6FV3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FV3 entry

There are 4 chains in PDB entry 6FV3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	VAL 377
B	HIS 0	VAL 377
C	HIS 0	VAL 377
D	HIS 0	VAL 377

There are 51 helices in PDB entry 6FV3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	66	68	Right-handed 310
Helix 2	AA2	A	69	83	Right-handed alpha
Helix 3	AA3	A	96	113	Right-handed alpha
Helix 4	AA4	A	127	131	Right-handed 310
Helix 5	AA5	A	135	139	Right-handed 310
Helix 6	AA6	A	143	155	Right-handed alpha
Helix 7	AA7	A	169	180	Right-handed alpha
Helix 8	AA8	A	192	203	Right-handed alpha
Helix 9	AA9	A	223	231	Right-handed alpha
Helix 10	AB1	A	246	258	Right-handed alpha
Helix 11	AB2	A	307	319	Right-handed alpha
Helix 12	AB3	A	322	335	Right-handed alpha
Helix 13	AB4	A	335	342	Right-handed alpha
Helix 14	AB5	B	66	68	Right-handed 310
Helix 15	AB6	B	69	83	Right-handed alpha
Helix 16	AB7	B	96	113	Right-handed alpha
Helix 17	AB8	B	127	131	Right-handed 310
Helix 18	AB9	B	135	139	Right-handed 310
Helix 19	AC1	B	143	155	Right-handed alpha
Helix 20	AC2	B	169	180	Right-handed alpha
Helix 21	AC3	B	192	203	Right-handed alpha
Helix 22	AC4	B	223	231	Right-handed alpha
Helix 23	AC5	B	246	258	Right-handed alpha
Helix 24	AC6	B	307	319	Right-handed alpha
Helix 25	AC7	B	322	335	Right-handed alpha
Helix 26	AC8	B	335	342	Right-handed alpha
Helix 27	AC9	C	66	68	Right-handed 310
Helix 28	AD1	C	69	83	Right-handed alpha
Helix 29	AD2	C	96	113	Right-handed alpha
Helix 30	AD3	C	127	131	Right-handed 310
Helix 31	AD4	C	135	139	Right-handed 310
Helix 32	AD5	C	143	155	Right-handed alpha
Helix 33	AD6	C	169	180	Right-handed alpha
Helix 34	AD7	C	192	202	Right-handed alpha
Helix 35	AD8	C	223	231	Right-handed alpha
Helix 36	AD9	C	246	258	Right-handed alpha
Helix 37	AE1	C	307	319	Right-handed alpha
Helix 38	AE2	C	322	335	Right-handed alpha
Helix 39	AE3	C	335	342	Right-handed alpha
Helix 40	AE4	D	66	68	Right-handed 310
Helix 41	AE5	D	69	83	Right-handed alpha
Helix 42	AE6	D	96	113	Right-handed alpha
Helix 43	AE7	D	135	139	Right-handed 310
Helix 44	AE8	D	143	155	Right-handed alpha
Helix 45	AE9	D	169	180	Right-handed alpha
Helix 46	AF1	D	192	203	Right-handed alpha
Helix 47	AF2	D	223	231	Right-handed alpha
Helix 48	AF3	D	246	258	Right-handed alpha
Helix 49	AF4	D	307	319	Right-handed alpha
Helix 50	AF5	D	322	335	Right-handed alpha
Helix 51	AF6	D	335	342	Right-handed alpha

There are 19 sheets in PDB entry 6FV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	32	first strand
Strand 2	A	18	23	anti-parallel
Strand 3	A	1	5	anti-parallel
Strand 4	A	41	42	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	A	7	9	anti-parallel
Strand 3	A	47	50	parallel
Strand 4	A	357	360	anti-parallel
Strand 5	A	366	371	anti-parallel
Strand 6	A	374	375	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	57	first strand
Strand 2	A	85	92	parallel
Strand 3	A	118	122	parallel
Strand 4	A	158	163	parallel
Strand 5	A	183	186	parallel
Strand 6	A	206	207	parallel
Strand 7	A	235	239	parallel
Strand 8	A	262	265	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	A	63	64	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	278	first strand
Strand 2	A	286	288	anti-parallel
Strand 3	A	293	295	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	32	first strand
Strand 2	B	18	21	anti-parallel
Strand 3	B	2	5	anti-parallel
Strand 4	B	41	42	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	7	9	anti-parallel
Strand 3	B	47	50	parallel
Strand 4	B	357	360	anti-parallel
Strand 5	B	366	371	anti-parallel
Strand 6	B	374	377	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	57	first strand
Strand 2	B	85	92	parallel
Strand 3	B	118	122	parallel
Strand 4	B	158	163	parallel
Strand 5	B	183	186	parallel
Strand 6	B	204	207	parallel
Strand 7	B	235	239	parallel
Strand 8	B	262	265	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	60	first strand
Strand 2	B	63	64	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	280	first strand
Strand 2	B	284	288	anti-parallel
Strand 3	B	292	295	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	32	first strand
Strand 2	C	18	23	anti-parallel
Strand 3	C	1	5	anti-parallel
Strand 4	C	41	42	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	15	first strand
Strand 2	C	7	9	anti-parallel
Strand 3	C	47	50	parallel
Strand 4	C	357	360	anti-parallel
Strand 5	C	366	371	anti-parallel
Strand 6	C	374	375	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	57	first strand
Strand 2	C	85	92	parallel
Strand 3	C	118	121	parallel
Strand 4	C	158	163	parallel
Strand 5	C	183	186	parallel
Strand 6	C	206	207	parallel
Strand 7	C	235	239	parallel
Strand 8	C	262	265	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	63	64	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	280	first strand
Strand 2	C	284	288	anti-parallel
Strand 3	C	292	295	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	32	first strand
Strand 2	D	18	21	anti-parallel
Strand 3	D	2	5	anti-parallel
Strand 4	D	41	42	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	7	9	anti-parallel
Strand 3	D	47	50	parallel
Strand 4	D	357	360	anti-parallel
Strand 5	D	366	371	anti-parallel
Strand 6	D	374	377	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	57	first strand
Strand 2	D	85	92	parallel
Strand 3	D	118	122	parallel
Strand 4	D	158	163	parallel
Strand 5	D	183	186	parallel
Strand 6	D	206	207	parallel
Strand 7	D	235	239	parallel
Strand 8	D	262	265	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	60	first strand
Strand 2	D	63	64	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FV3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FV3