Analysis of interatomic Contacts of Structural Units in PDB entry:
6FV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FV4 entry

There are 2 chains in PDB entry 6FV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2THR 378
B
 GLY -2ALA 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6FV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 68Right-handed 310
Helix 2
AA2
A
69 83Right-handed alpha
Helix 3
AA3
A
96 113Right-handed alpha
Helix 4
AA4
A
127 131Right-handed 310
Helix 5
AA5
A
135 139Right-handed 310
Helix 6
AA6
A
143 155Right-handed alpha
Helix 7
AA7
A
169 180Right-handed alpha
Helix 8
AA8
A
192 202Right-handed alpha
Helix 9
AA9
A
223 231Right-handed alpha
Helix 10
AB1
A
246 258Right-handed alpha
Helix 11
AB2
A
307 319Right-handed alpha
Helix 12
AB3
A
322 335Right-handed alpha
Helix 13
AB4
A
335 342Right-handed alpha
Helix 14
AB5
B
66 68Right-handed 310
Helix 15
AB6
B
69 83Right-handed alpha
Helix 16
AB7
B
96 113Right-handed alpha
Helix 17
AB8
B
135 139Right-handed 310
Helix 18
AB9
B
143 155Right-handed alpha
Helix 19
AC1
B
169 180Right-handed alpha
Helix 20
AC2
B
192 202Right-handed alpha
Helix 21
AC3
B
223 231Right-handed alpha
Helix 22
AC4
B
246 258Right-handed alpha
Helix 23
AC5
B
307 319Right-handed alpha
Helix 24
AC6
B
322 335Right-handed alpha
Helix 25
AC7
B
335 342Right-handed alpha
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There are 10 sheets in PDB entry 6FV4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 32first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
1 5anti-parallel
Strand 4
A
41 42parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 15first strand
Strand 2
A
7 9anti-parallel
Strand 3
A
47 50parallel
Strand 4
A
357 360anti-parallel
Strand 5
A
366 371anti-parallel
Strand 6
A
374 377anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
85 92parallel
Strand 3
A
118 122parallel
Strand 4
A
158 163parallel
Strand 5
A
183 186parallel
Strand 6
A
206 207parallel
Strand 7
A
235 239parallel
Strand 8
A
262 265parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
63 64anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
284 289anti-parallel
Strand 3
A
292 295anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 32first strand
Strand 2
B
18 23anti-parallel
Strand 3
B
0 5anti-parallel
Strand 4
B
41 42parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 15first strand
Strand 2
B
7 9anti-parallel
Strand 3
B
47 50parallel
Strand 4
B
357 360anti-parallel
Strand 5
B
366 371anti-parallel
Strand 6
B
374 377anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 57first strand
Strand 2
B
85 93parallel
Strand 3
B
119 122parallel
Strand 4
B
158 163parallel
Strand 5
B
183 186parallel
Strand 6
B
206 207parallel
Strand 7
B
235 239parallel
Strand 8
B
262 265parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
B
63 64anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 281first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
292 295anti-parallel
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