Analysis of interatomic Contacts of Structural Units in PDB entry:
6FW9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FW9 entry

There are 2 chains in PDB entry 6FW9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 2ALA 418
A
 LYS 2ALA 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6FW9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 26Right-handed alpha
Helix 2
AA2
B
27 30Right-handed 310
Helix 3
AA3
B
53 55Right-handed 310
Helix 4
AA4
B
70 80Right-handed alpha
Helix 5
AA5
B
100 110Right-handed alpha
Helix 6
AA6
B
111 115Right-handed 310
Helix 7
AA7
B
120 126Right-handed alpha
Helix 8
AA8
B
130 139Right-handed alpha
Helix 9
AA9
B
140 142Right-handed 310
Helix 10
AB1
B
143 148Right-handed 310
Helix 11
AB2
B
152 163Right-handed alpha
Helix 12
AB3
B
166 171Right-handed 310
Helix 13
AB4
B
184 198Right-handed alpha
Helix 14
AB5
B
242 248Right-handed alpha
Helix 15
AB6
B
277 283Right-handed 310
Helix 16
AB7
B
312 324Right-handed alpha
Helix 17
AB8
B
325 342Right-handed alpha
Helix 18
AB9
B
344 348Right-handed 310
Helix 19
AC1
B
388 392Right-handed 310
Helix 20
AC2
B
397 417Right-handed alpha
Helix 21
AC3
A
13 26Right-handed alpha
Helix 22
AC4
A
27 30Right-handed 310
Helix 23
AC5
A
70 80Right-handed alpha
Helix 24
AC6
A
96 108Right-handed alpha
Helix 25
AC7
A
112 117Right-handed alpha
Helix 26
AC8
A
120 126Right-handed alpha
Helix 27
AC9
A
130 140Right-handed alpha
Helix 28
AD1
A
141 142Right-handed 310
Helix 29
AD2
A
143 148Right-handed 310
Helix 30
AD3
A
152 162Right-handed alpha
Helix 31
AD4
A
166 170Right-handed 310
Helix 32
AD5
A
184 198Right-handed alpha
Helix 33
AD6
A
242 248Right-handed alpha
Helix 34
AD7
A
277 281Right-handed 310
Helix 35
AD8
A
312 324Right-handed alpha
Helix 36
AD9
A
325 342Right-handed alpha
Helix 37
AE1
A
344 348Right-handed 310
Helix 38
AE2
A
388 392Right-handed 310
Helix 39
AE3
A
397 418Right-handed alpha
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There are 10 sheets in PDB entry 6FW9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 204first strand
Strand 2
B
34 38parallel
Strand 3
B
4 10parallel
Strand 4
B
229 239parallel
Strand 5
B
217 224anti-parallel
Strand 6
B
206 214anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 204first strand
Strand 2
B
34 38parallel
Strand 3
B
4 10parallel
Strand 4
B
229 239parallel
Strand 5
B
385 386parallel
Strand 6
B
377 378anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
56 59anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
178 180anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
297 301anti-parallel
Strand 3
B
305 311anti-parallel
Strand 4
B
261 272anti-parallel
Strand 5
B
354 367anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
34 38parallel
Strand 3
A
4 10parallel
Strand 4
A
229 239parallel
Strand 5
A
217 224anti-parallel
Strand 6
A
206 214anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
34 38parallel
Strand 3
A
4 10parallel
Strand 4
A
229 239parallel
Strand 5
A
385 386parallel
Strand 6
A
377 378anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
56 59anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
178 180anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
297 301anti-parallel
Strand 3
A
305 311anti-parallel
Strand 4
A
262 272anti-parallel
Strand 5
A
354 366anti-parallel
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