Analysis of interatomic Contacts of Structural Units in PDB entry:
6FWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FWR entry

There are 2 chains in PDB entry 6FWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LYS 704
B
 T 1 T 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 6FWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 20Right-handed alpha
Helix 2
AA2
A
28 43Right-handed alpha
Helix 3
AA3
A
59 76Right-handed alpha
Helix 4
AA4
A
85 95Right-handed alpha
Helix 5
AA5
A
95 104Right-handed alpha
Helix 6
AA6
A
114 118Right-handed 310
Helix 7
AA7
A
120 130Right-handed alpha
Helix 8
AA8
A
136 143Right-handed alpha
Helix 9
AA9
A
149 165Right-handed alpha
Helix 10
AB1
A
171 175Right-handed 310
Helix 11
AB2
A
180 188Right-handed alpha
Helix 12
AB3
A
195 199Right-handed 310
Helix 13
AB4
A
201 204Right-handed 310
Helix 14
AB5
A
205 216Right-handed alpha
Helix 15
AB6
A
224 233Right-handed alpha
Helix 16
AB7
A
239 241Right-handed 310
Helix 17
AB8
A
249 251Right-handed 310
Helix 18
AB9
A
252 259Right-handed alpha
Helix 19
AC1
A
268 290Right-handed alpha
Helix 20
AC2
A
296 299Right-handed 310
Helix 21
AC3
A
300 324Right-handed alpha
Helix 22
AC4
A
337 340Right-handed 310
Helix 23
AC5
A
342 373Right-handed alpha
Helix 24
AC6
A
379 408Right-handed alpha
Helix 25
AC7
A
440 448Right-handed alpha
Helix 26
AC8
A
468 476Right-handed alpha
Helix 27
AC9
A
493 497Right-handed alpha
Helix 28
AD1
A
513 531Right-handed alpha
Helix 29
AD2
A
543 554Right-handed alpha
Helix 30
AD3
A
555 559Right-handed 310
Helix 31
AD4
A
568 582Right-handed alpha
Helix 32
AD5
A
591 598Right-handed alpha
Helix 33
AD6
A
601 605Right-handed 310
Helix 34
AD7
A
620 633Right-handed alpha
Helix 35
AD8
A
636 641Right-handed alpha
Helix 36
AD9
A
641 655Right-handed alpha
Helix 37
AE1
A
672 677Right-handed alpha
Helix 38
AE2
A
677 686Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6FWR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
219 223parallel
Strand 3
A
78 83parallel
Strand 4
A
243 247parallel
Strand 5
A
455 459parallel
Strand 6
A
50 53parallel
Strand 7
A
484 487parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 266first strand
Strand 2
A
429 437anti-parallel
Strand 3
A
416 424anti-parallel
Strand 4
A
332 335anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 563first strand
Strand 2
A
586 590parallel
Strand 3
A
536 540parallel
Strand 4
A
607 610parallel
Strand 5
A
665 669parallel
Strand 6
A
498 501parallel
Strand 7
A
692 693parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il