Analysis of interatomic Contacts of Structural Units in PDB entry:
6FWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FWU entry

There are 2 chains in PDB entry 6FWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 126PRO 397
B
 SER 126PRO 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6FWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
150 158Right-handed alpha
Helix 2
AA2
A
187 205Right-handed alpha
Helix 3
AA3
A
223 239Right-handed alpha
Helix 4
AA4
A
279 284Right-handed alpha
Helix 5
AA5
A
294 300Right-handed alpha
Helix 6
AA6
A
311 316Right-handed 310
Helix 7
AA7
A
317 324Right-handed alpha
Helix 8
AA8
A
365 369Right-handed alpha
Helix 9
AA9
A
370 374Right-handed 310
Helix 10
AB1
B
150 158Right-handed alpha
Helix 11
AB2
B
187 205Right-handed alpha
Helix 12
AB3
B
223 239Right-handed alpha
Helix 13
AB4
B
279 284Right-handed alpha
Helix 14
AB5
B
294 300Right-handed alpha
Helix 15
AB6
B
311 316Right-handed 310
Helix 16
AB7
B
317 324Right-handed alpha
Helix 17
AB8
B
364 368Right-handed 310
Helix 18
AB9
B
370 374Right-handed 310
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There are 6 sheets in PDB entry 6FWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
208 216anti-parallel
Strand 3
A
177 184parallel
Strand 4
A
243 247parallel
Strand 5
A
289 293anti-parallel
Strand 6
A
267 268anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
208 216anti-parallel
Strand 3
A
388 393parallel
Strand 4
A
377 383anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 253first strand
Strand 2
A
337 340anti-parallel
Strand 3
A
272 273parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 167first strand
Strand 2
B
208 216anti-parallel
Strand 3
B
177 184parallel
Strand 4
B
243 247parallel
Strand 5
B
289 293anti-parallel
Strand 6
B
267 268anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 167first strand
Strand 2
B
208 216anti-parallel
Strand 3
B
388 393parallel
Strand 4
B
377 383anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 253first strand
Strand 2
B
337 340anti-parallel
Strand 3
B
272 273parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il